UPSP:TYDP1_YEAST (TDP1): /home/Demos/CPAS/demo

UPSP:TYDP1_YEAST (TDP1)

demo

UPSP:TYDP1_YEAST (TDP1)

Run	MM_clICAT11.pep.xml (Peroxisomal_ICAT/MM_clICAT11 (k_Yeast_ICAT))
Sequence Mass	62,333
AA Coverage	1% (5 / 544)
Mass Coverage	1% (503 / 62,333)
Peptides?

Protein Sequence

Detail View

Summary View

Export

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	S	R	E	T	N	F	N	G	T	K	R	K	R	S	D	V	A	E	K	V	A	Q	R	W	K	S	V	R	Y	S	A	E	M	E	N	M	A	P	V	N	S	N	N	D	S	D	D	C	V	I	V	S	E	S	K	I	I	D	L	T	N	Q	E	Q	D	L	S	E	R	I	E	T	N	D	T	A	K	G	A	V	F	K	L	M	K	S	D	F	Y	E	R	E	D	F	M	G	E	V	E
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D	M	I	T	L	K	D	I	F	G	T	E	T	L	K	R	S	I	L	F	S	F	Q	Y	E	L	D	F	L	L	R	Q	F	H	Q	N	V	E	N	I	T	I	V	G	Q	K	G	T	I	M	P	I	E	A	R	A	M	D	A	T	L	A	V	I	L	K	K	V	K	L	I	E	I	T	M	P	P	F	A	S	H	H	T	K	L	I	I	N	F	Y	D	N	G	E	C	K	I	F	L	P


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S	N	N	F	T	S	M	E	T	N	L	P	Q	Q	V	C	W	C	S	P	L	L	K	I	G	K	E	G	L	P	V	P	F	K	R	S	L	I	E	Y	L	N	S	Y	H	L	K	D	I	D	E	L	I	T	K	S	V	E	E	V	N	F	A	P	L	S	E	L	E	F	V	Y	S	T	P	S	K	F	Q	S	S	G	L	L	S	F	Y	N	K	L	E	K	L	S	A	G	T	S	A	S


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D	T	A	K	H	Y	L	C	Q	T	S	S	I	G	T	S	L	S	R	A	R	D	E	N	L	W	T	H	L	M	I	P	L	F	T	G	I	M	S	P	P	A	K	D	T	A	G	R	K	K	A	E	I	L	P	T	N	S	L	I	N	E	Y	S	Q	R	K	I	K	P	Y	I	I	F	P	T	E	Q	E	F	V	T	S	P	L	K	W	S	S	S	G	W	F	H	F	Q	Y	L	Q	K


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K	S	Y	Y	E	M	L	R	N	K	F	K	V	F	Y	K	Q	D	P	A	M	V	T	R	R	R	G	T	T	P	A	H	S	K	F	Y	M	H	C	A	T	N	S	A	G	P	C	D	A	S	Q	V	F	K	E	L	E	W	C	L	Y	T	S	A	N	L	S	Q	T	A	W	G	T	V	S	R	K	P	R	N	Y	E	A	G	V	L	Y	H	S	R	R	L	A	N	T	R	K	V	T	C


501										511										521										531										541
R	T	F	T	R	D	R	R	G	C	A	G	N	P	T	H	V	A	V	P	F	T	L	P	V	I	P	Y	D	L	A	E	D	E	C	F	C	L	A	R	H	E	N	D

Annotations for TDP1

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
none loaded	none loaded	P38319	TYDP1_YEAST	YBR223C	none loaded	GO:0005515 GO:0005634 GO:0006281 GO:0017005

Peptides

Peptide Filter:	(SeqId = 282785)
Peptide Sort:
Peptide Counts:	1 total, 1 distinct

Select All Select None Show Selected Show Unselected Show All	Scan Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Hyper Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Next Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	B Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Y Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Expect Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Ion% Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	CalcMH+ Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	dMass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	PepProphet Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	SeqHits Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Protein Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
	495	1+	136.000	100.000	0.000	0.000	190.000	50%	521.3080	+1.0330	0.6049	K.GAVFK.L	1	UPSP:TYDP1_YEAST

Description	Tyrosyl-DNA phosphodiesterase 1
Gene name	TDP1
Organism	Saccharomyces cerevisiae

LabKey Support

LabKey Support

UPSP:TYDP1_YEAST (TDP1)

UPSP:TYDP1_YEAST (TDP1)

Protein Sequence

Annotations for TDP1

Peptides

1										11										21										31										41										51										61										71										81										91
M	S	R	E	T	N	F	N	G	T	K	R	K	R	S	D	V	A	E	K	V	A	Q	R	W	K	S	V	R	Y	S	A	E	M	E	N	M	A	P	V	N	S	N	N	D	S	D	D	C	V	I	V	S	E	S	K	I	I	D	L	T	N	Q	E	Q	D	L	S	E	R	I	E	T	N	D	T	A	K	G	A	V	F	K	L	M	K	S	D	F	Y	E	R	E	D	F	M	G	E	V	E
																																																																														1

101										111										121										131										141										151										161										171										181										191
D	M	I	T	L	K	D	I	F	G	T	E	T	L	K	R	S	I	L	F	S	F	Q	Y	E	L	D	F	L	L	R	Q	F	H	Q	N	V	E	N	I	T	I	V	G	Q	K	G	T	I	M	P	I	E	A	R	A	M	D	A	T	L	A	V	I	L	K	K	V	K	L	I	E	I	T	M	P	P	F	A	S	H	H	T	K	L	I	I	N	F	Y	D	N	G	E	C	K	I	F	L	P


201										211										221										231										241										251										261										271										281										291
S	N	N	F	T	S	M	E	T	N	L	P	Q	Q	V	C	W	C	S	P	L	L	K	I	G	K	E	G	L	P	V	P	F	K	R	S	L	I	E	Y	L	N	S	Y	H	L	K	D	I	D	E	L	I	T	K	S	V	E	E	V	N	F	A	P	L	S	E	L	E	F	V	Y	S	T	P	S	K	F	Q	S	S	G	L	L	S	F	Y	N	K	L	E	K	L	S	A	G	T	S	A	S


301										311										321										331										341										351										361										371										381										391
D	T	A	K	H	Y	L	C	Q	T	S	S	I	G	T	S	L	S	R	A	R	D	E	N	L	W	T	H	L	M	I	P	L	F	T	G	I	M	S	P	P	A	K	D	T	A	G	R	K	K	A	E	I	L	P	T	N	S	L	I	N	E	Y	S	Q	R	K	I	K	P	Y	I	I	F	P	T	E	Q	E	F	V	T	S	P	L	K	W	S	S	S	G	W	F	H	F	Q	Y	L	Q	K


401										411										421										431										441										451										461										471										481										491
K	S	Y	Y	E	M	L	R	N	K	F	K	V	F	Y	K	Q	D	P	A	M	V	T	R	R	R	G	T	T	P	A	H	S	K	F	Y	M	H	C	A	T	N	S	A	G	P	C	D	A	S	Q	V	F	K	E	L	E	W	C	L	Y	T	S	A	N	L	S	Q	T	A	W	G	T	V	S	R	K	P	R	N	Y	E	A	G	V	L	Y	H	S	R	R	L	A	N	T	R	K	V	T	C


501										511										521										531										541
R	T	F	T	R	D	R	R	G	C	A	G	N	P	T	H	V	A	V	P	F	T	L	P	V	I	P	Y	D	L	A	E	D	E	C	F	C	L	A	R	H	E	N	D

1										11										21										31										41										51										61										71										81										91
M	S	R	E	T	N	F	N	G	T	K	R	K	R	S	D	V	A	E	K	V	A	Q	R	W	K	S	V	R	Y	S	A	E	M	E	N	M	A	P	V	N	S	N	N	D	S	D	D	C	V	I	V	S	E	S	K	I	I	D	L	T	N	Q	E	Q	D	L	S	E	R	I	E	T	N	D	T	A	K	G	A	V	F	K	L	M	K	S	D	F	Y	E	R	E	D	F	M	G	E	V	E
																																																																														1

101										111										121										131										141										151										161										171										181										191
D	M	I	T	L	K	D	I	F	G	T	E	T	L	K	R	S	I	L	F	S	F	Q	Y	E	L	D	F	L	L	R	Q	F	H	Q	N	V	E	N	I	T	I	V	G	Q	K	G	T	I	M	P	I	E	A	R	A	M	D	A	T	L	A	V	I	L	K	K	V	K	L	I	E	I	T	M	P	P	F	A	S	H	H	T	K	L	I	I	N	F	Y	D	N	G	E	C	K	I	F	L	P


201										211										221										231										241										251										261										271										281										291
S	N	N	F	T	S	M	E	T	N	L	P	Q	Q	V	C	W	C	S	P	L	L	K	I	G	K	E	G	L	P	V	P	F	K	R	S	L	I	E	Y	L	N	S	Y	H	L	K	D	I	D	E	L	I	T	K	S	V	E	E	V	N	F	A	P	L	S	E	L	E	F	V	Y	S	T	P	S	K	F	Q	S	S	G	L	L	S	F	Y	N	K	L	E	K	L	S	A	G	T	S	A	S


301										311										321										331										341										351										361										371										381										391
D	T	A	K	H	Y	L	C	Q	T	S	S	I	G	T	S	L	S	R	A	R	D	E	N	L	W	T	H	L	M	I	P	L	F	T	G	I	M	S	P	P	A	K	D	T	A	G	R	K	K	A	E	I	L	P	T	N	S	L	I	N	E	Y	S	Q	R	K	I	K	P	Y	I	I	F	P	T	E	Q	E	F	V	T	S	P	L	K	W	S	S	S	G	W	F	H	F	Q	Y	L	Q	K


401										411										421										431										441										451										461										471										481										491
K	S	Y	Y	E	M	L	R	N	K	F	K	V	F	Y	K	Q	D	P	A	M	V	T	R	R	R	G	T	T	P	A	H	S	K	F	Y	M	H	C	A	T	N	S	A	G	P	C	D	A	S	Q	V	F	K	E	L	E	W	C	L	Y	T	S	A	N	L	S	Q	T	A	W	G	T	V	S	R	K	P	R	N	Y	E	A	G	V	L	Y	H	S	R	R	L	A	N	T	R	K	V	T	C


501										511										521										531										541
R	T	F	T	R	D	R	R	G	C	A	G	N	P	T	H	V	A	V	P	F	T	L	P	V	I	P	Y	D	L	A	E	D	E	C	F	C	L	A	R	H	E	N	D

1										11										21										31										41										51										61										71										81										91
M	S	R	E	T	N	F	N	G	T	K	R	K	R	S	D	V	A	E	K	V	A	Q	R	W	K	S	V	R	Y	S	A	E	M	E	N	M	A	P	V	N	S	N	N	D	S	D	D	C	V	I	V	S	E	S	K	I	I	D	L	T	N	Q	E	Q	D	L	S	E	R	I	E	T	N	D	T	A	K	G	A	V	F	K	L	M	K	S	D	F	Y	E	R	E	D	F	M	G	E	V	E
																																																																														1

101										111										121										131										141										151										161										171										181										191
D	M	I	T	L	K	D	I	F	G	T	E	T	L	K	R	S	I	L	F	S	F	Q	Y	E	L	D	F	L	L	R	Q	F	H	Q	N	V	E	N	I	T	I	V	G	Q	K	G	T	I	M	P	I	E	A	R	A	M	D	A	T	L	A	V	I	L	K	K	V	K	L	I	E	I	T	M	P	P	F	A	S	H	H	T	K	L	I	I	N	F	Y	D	N	G	E	C	K	I	F	L	P


201										211										221										231										241										251										261										271										281										291
S	N	N	F	T	S	M	E	T	N	L	P	Q	Q	V	C	W	C	S	P	L	L	K	I	G	K	E	G	L	P	V	P	F	K	R	S	L	I	E	Y	L	N	S	Y	H	L	K	D	I	D	E	L	I	T	K	S	V	E	E	V	N	F	A	P	L	S	E	L	E	F	V	Y	S	T	P	S	K	F	Q	S	S	G	L	L	S	F	Y	N	K	L	E	K	L	S	A	G	T	S	A	S


301										311										321										331										341										351										361										371										381										391
D	T	A	K	H	Y	L	C	Q	T	S	S	I	G	T	S	L	S	R	A	R	D	E	N	L	W	T	H	L	M	I	P	L	F	T	G	I	M	S	P	P	A	K	D	T	A	G	R	K	K	A	E	I	L	P	T	N	S	L	I	N	E	Y	S	Q	R	K	I	K	P	Y	I	I	F	P	T	E	Q	E	F	V	T	S	P	L	K	W	S	S	S	G	W	F	H	F	Q	Y	L	Q	K


401										411										421										431										441										451										461										471										481										491
K	S	Y	Y	E	M	L	R	N	K	F	K	V	F	Y	K	Q	D	P	A	M	V	T	R	R	R	G	T	T	P	A	H	S	K	F	Y	M	H	C	A	T	N	S	A	G	P	C	D	A	S	Q	V	F	K	E	L	E	W	C	L	Y	T	S	A	N	L	S	Q	T	A	W	G	T	V	S	R	K	P	R	N	Y	E	A	G	V	L	Y	H	S	R	R	L	A	N	T	R	K	V	T	C


501										511										521										531										541
R	T	F	T	R	D	R	R	G	C	A	G	N	P	T	H	V	A	V	P	F	T	L	P	V	I	P	Y	D	L	A	E	D	E	C	F	C	L	A	R	H	E	N	D