IPI00123555.3: /home/Demos/CPAS/labelfreedemo/demoset

IPI00123555.3

demoset

IPI00123555.3

Run	VARMIX_B_04.pep.xml (Experiment Import - AphaSet.xar)
Sequence Mass	99,538
AA Coverage	1% (8 / 931)
Mass Coverage	1% (722 / 99,538)
Peptides?

Protein Sequence

Detail View

Summary View

Export

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	P	R	A	P	H	S	M	P	L	L	L	L	L	L	L	L	S	S	L	P	Q	A	Q	A	A	F	P	Q	D	P	T	P	L	L	T	S	D	L	Q	G	A	S	P	S	S	W	F	R	G	L	E	D	D	A	V	A	A	E	L	G	L	D	F	Q	R	F	L	T	L	N	R	T	L	L	V	A	A	R	D	H	V	F	S	F	D	L	Q	A	Q	E	E	G	E	G	L	V	P	N	K


101										111										121										131										141										151										161										171										181										191
F	L	T	W	R	S	Q	D	M	E	N	C	A	V	R	G	K	L	T	D	E	C	Y	N	Y	I	R	V	L	V	P	W	N	S	Q	T	L	L	A	C	G	T	N	S	F	S	P	M	C	R	S	Y	G	I	T	S	L	Q	Q	E	G	E	E	L	S	G	Q	A	R	C	P	F	D	A	T	Q	S	T	V	A	I	F	A	E	G	S	L	Y	S	A	T	A	A	D	F	Q	A	S	D	A


201										211										221										231										241										251										261										271										281										291
V	V	Y	R	S	L	G	P	Q	P	P	L	R	S	A	K	Y	D	S	K	W	L	R	E	P	H	F	V	Y	A	L	E	H	G	E	H	V	Y	F	F	F	R	E	V	S	V	E	D	A	R	L	G	R	V	Q	F	S	R	V	A	R	V	C	K	R	D	M	G	G	S	P	R	A	L	D	R	H	W	T	S	F	L	K	L	R	L	N	C	S	V	P	G	D	S	T	F	Y	F	D	V


301										311										321										331										341										351										361										371										381										391
L	Q	S	L	T	G	P	V	N	L	H	G	R	S	A	L	F	G	V	F	T	T	Q	T	N	S	I	P	G	S	A	V	C	A	F	Y	L	D	D	I	E	R	G	F	E	G	K	F	K	E	Q	R	S	L	D	G	A	W	T	P	V	S	E	D	K	V	P	S	P	R	P	G	S	C	A	G	V	G	A	A	A	S	F	S	S	S	Q	D	L	P	D	D	V	L	L	F	I	K	A	H


401										411										421										431										441										451										461										471										481										491
P	L	L	D	P	A	V	P	P	A	T	H	Q	P	L	L	T	L	T	S	R	A	L	L	T	Q	V	A	V	D	G	M	A	G	P	H	R	N	T	T	V	L	F	L	G	S	N	D	G	T	V	L	K	V	L	P	P	G	G	Q	S	L	G	S	E	P	I	V	L	E	E	I	D	A	Y	S	H	A	R	C	S	G	K	R	S	P	R	A	A	R	R	I	I	G	L	E	L	D	T	E


501										511										521										531										541										551										561										571										581										591
G	H	R	L	F	V	A	F	P	G	C	I	V	Y	L	S	L	S	R	C	A	R	H	G	A	C	Q	R	S	C	L	A	S	L	D	P	Y	C	G	W	H	R	S	R	G	C	M	S	I	R	G	P	G	G	T	D	V	D	L	T	G	N	Q	E	S	T	E	H	G	D	C	Q	D	G	A	T	G	S	Q	S	G	P	G	D	S	A	Y	G	V	R	R	D	L	S	P	A	S	A	S	R


601										611										621										631										641										651										661										671										681										691
S	I	P	I	P	L	L	L	A	C	V	A	A	A	F	A	L	G	A	S	V	S	G	L	L	V	S	C	A	C	R	R	A	N	R	R	R	S	K	D	I	E	T	P	G	L	P	R	P	L	S	L	R	S	L	A	R	L	H	G	G	G	P	E	P	P	P	P	P	K	D	G	D	A	A	Q	T	P	Q	L	Y	T	T	F	L	P	P	P	D	G	G	S	P	P	E	L	A	C	L	P


701										711										721										731										741										751										761										771										781										791
T	P	E	T	T	P	E	L	P	V	K	H	L	R	A	S	G	G	P	W	E	W	N	Q	N	G	N	N	A	S	E	G	P	G	R	P	P	R	G	C	S	G	A	G	G	P	A	P	R	V	L	V	R	P	P	P	P	G	C	P	G	Q	A	V	E	V	T	T	L	E	E	L	L	R	Y	L	H	G	P	Q	P	P	R	K	G	S	E	P	L	A	S	A	P	F	T	S	R	P	P	A


801										811										821										831										841										851										861										871										881										891
S	E	P	G	A	S	L	F	V	D	S	S	P	M	P	R	D	G	V	P	P	L	R	L	D	V	P	P	E	G	K	R	A	A	P	S	G	R	P	A	L	S	A	P	A	P	R	L	G	V	G	G	S	R	R	L	P	F	P	T	H	R	A	P	P	G	L	L	T	R	V	P	S	G	G	P	A	R	Y	S	G	G	P	G	R	H	L	L	Y	L	G	R	P	E	G	H	R	G	R	S
																																																																						1

901										911										921										931
L	K	R	V	D	V	K	S	P	L	S	P	K	P	P	L	A	S	P	P	Q	P	A	P	H	G	G	H	F	N	F

Annotations for IPI00123555.3

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
NP_035481	none loaded	Q3TU06 Q6ZPG8 Q9WTM3	none loaded	ENSMUSP00000078820 ENSMUSP00000088329 ENSMUSP00000088331	IPI00123555	none loaded

Peptides

Peptide Filter:	(SeqId = 225525)
Peptide Sort:
Peptide Counts:	1 total, 1 distinct

Select All Select None Show Selected Show Unselected Show All	Scan Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Hyper Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Next Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	B Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Y Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Expect Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Ion% Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	CalcMH+ Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	dMass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	PepProphet Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	SeqHits Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Protein Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
	490	1+	175.000	166.000	0.000	0.000	4.600	36%	740.4050	+0.7900	0.2105	R.VPSGGPAR.Y	3	IPI00123555.3

Description	IPI:IPI00123555.3\|SWISS-PROT:Q9WTM3\|TREMBL:Q6ZPG8;Q3TU06\|REFSEQ_NP:NP_035481\|ENSEMBL:ENSMUSP00000088329;ENSMUSP00000078820 Tax_Id=10090 Semaphorin-6C precursor
Gene name	Sema6c
Organism	Mus musculus

LabKey Support

LabKey Support

IPI00123555.3

IPI00123555.3

Protein Sequence

Annotations for IPI00123555.3

Peptides

1										11										21										31										41										51										61										71										81										91
M	P	R	A	P	H	S	M	P	L	L	L	L	L	L	L	L	S	S	L	P	Q	A	Q	A	A	F	P	Q	D	P	T	P	L	L	T	S	D	L	Q	G	A	S	P	S	S	W	F	R	G	L	E	D	D	A	V	A	A	E	L	G	L	D	F	Q	R	F	L	T	L	N	R	T	L	L	V	A	A	R	D	H	V	F	S	F	D	L	Q	A	Q	E	E	G	E	G	L	V	P	N	K


101										111										121										131										141										151										161										171										181										191
F	L	T	W	R	S	Q	D	M	E	N	C	A	V	R	G	K	L	T	D	E	C	Y	N	Y	I	R	V	L	V	P	W	N	S	Q	T	L	L	A	C	G	T	N	S	F	S	P	M	C	R	S	Y	G	I	T	S	L	Q	Q	E	G	E	E	L	S	G	Q	A	R	C	P	F	D	A	T	Q	S	T	V	A	I	F	A	E	G	S	L	Y	S	A	T	A	A	D	F	Q	A	S	D	A


201										211										221										231										241										251										261										271										281										291
V	V	Y	R	S	L	G	P	Q	P	P	L	R	S	A	K	Y	D	S	K	W	L	R	E	P	H	F	V	Y	A	L	E	H	G	E	H	V	Y	F	F	F	R	E	V	S	V	E	D	A	R	L	G	R	V	Q	F	S	R	V	A	R	V	C	K	R	D	M	G	G	S	P	R	A	L	D	R	H	W	T	S	F	L	K	L	R	L	N	C	S	V	P	G	D	S	T	F	Y	F	D	V


301										311										321										331										341										351										361										371										381										391
L	Q	S	L	T	G	P	V	N	L	H	G	R	S	A	L	F	G	V	F	T	T	Q	T	N	S	I	P	G	S	A	V	C	A	F	Y	L	D	D	I	E	R	G	F	E	G	K	F	K	E	Q	R	S	L	D	G	A	W	T	P	V	S	E	D	K	V	P	S	P	R	P	G	S	C	A	G	V	G	A	A	A	S	F	S	S	S	Q	D	L	P	D	D	V	L	L	F	I	K	A	H


401										411										421										431										441										451										461										471										481										491
P	L	L	D	P	A	V	P	P	A	T	H	Q	P	L	L	T	L	T	S	R	A	L	L	T	Q	V	A	V	D	G	M	A	G	P	H	R	N	T	T	V	L	F	L	G	S	N	D	G	T	V	L	K	V	L	P	P	G	G	Q	S	L	G	S	E	P	I	V	L	E	E	I	D	A	Y	S	H	A	R	C	S	G	K	R	S	P	R	A	A	R	R	I	I	G	L	E	L	D	T	E


501										511										521										531										541										551										561										571										581										591
G	H	R	L	F	V	A	F	P	G	C	I	V	Y	L	S	L	S	R	C	A	R	H	G	A	C	Q	R	S	C	L	A	S	L	D	P	Y	C	G	W	H	R	S	R	G	C	M	S	I	R	G	P	G	G	T	D	V	D	L	T	G	N	Q	E	S	T	E	H	G	D	C	Q	D	G	A	T	G	S	Q	S	G	P	G	D	S	A	Y	G	V	R	R	D	L	S	P	A	S	A	S	R


601										611										621										631										641										651										661										671										681										691
S	I	P	I	P	L	L	L	A	C	V	A	A	A	F	A	L	G	A	S	V	S	G	L	L	V	S	C	A	C	R	R	A	N	R	R	R	S	K	D	I	E	T	P	G	L	P	R	P	L	S	L	R	S	L	A	R	L	H	G	G	G	P	E	P	P	P	P	P	K	D	G	D	A	A	Q	T	P	Q	L	Y	T	T	F	L	P	P	P	D	G	G	S	P	P	E	L	A	C	L	P


701										711										721										731										741										751										761										771										781										791
T	P	E	T	T	P	E	L	P	V	K	H	L	R	A	S	G	G	P	W	E	W	N	Q	N	G	N	N	A	S	E	G	P	G	R	P	P	R	G	C	S	G	A	G	G	P	A	P	R	V	L	V	R	P	P	P	P	G	C	P	G	Q	A	V	E	V	T	T	L	E	E	L	L	R	Y	L	H	G	P	Q	P	P	R	K	G	S	E	P	L	A	S	A	P	F	T	S	R	P	P	A


801										811										821										831										841										851										861										871										881										891
S	E	P	G	A	S	L	F	V	D	S	S	P	M	P	R	D	G	V	P	P	L	R	L	D	V	P	P	E	G	K	R	A	A	P	S	G	R	P	A	L	S	A	P	A	P	R	L	G	V	G	G	S	R	R	L	P	F	P	T	H	R	A	P	P	G	L	L	T	R	V	P	S	G	G	P	A	R	Y	S	G	G	P	G	R	H	L	L	Y	L	G	R	P	E	G	H	R	G	R	S
																																																																						1

901										911										921										931
L	K	R	V	D	V	K	S	P	L	S	P	K	P	P	L	A	S	P	P	Q	P	A	P	H	G	G	H	F	N	F

1										11										21										31										41										51										61										71										81										91
M	P	R	A	P	H	S	M	P	L	L	L	L	L	L	L	L	S	S	L	P	Q	A	Q	A	A	F	P	Q	D	P	T	P	L	L	T	S	D	L	Q	G	A	S	P	S	S	W	F	R	G	L	E	D	D	A	V	A	A	E	L	G	L	D	F	Q	R	F	L	T	L	N	R	T	L	L	V	A	A	R	D	H	V	F	S	F	D	L	Q	A	Q	E	E	G	E	G	L	V	P	N	K


101										111										121										131										141										151										161										171										181										191
F	L	T	W	R	S	Q	D	M	E	N	C	A	V	R	G	K	L	T	D	E	C	Y	N	Y	I	R	V	L	V	P	W	N	S	Q	T	L	L	A	C	G	T	N	S	F	S	P	M	C	R	S	Y	G	I	T	S	L	Q	Q	E	G	E	E	L	S	G	Q	A	R	C	P	F	D	A	T	Q	S	T	V	A	I	F	A	E	G	S	L	Y	S	A	T	A	A	D	F	Q	A	S	D	A


201										211										221										231										241										251										261										271										281										291
V	V	Y	R	S	L	G	P	Q	P	P	L	R	S	A	K	Y	D	S	K	W	L	R	E	P	H	F	V	Y	A	L	E	H	G	E	H	V	Y	F	F	F	R	E	V	S	V	E	D	A	R	L	G	R	V	Q	F	S	R	V	A	R	V	C	K	R	D	M	G	G	S	P	R	A	L	D	R	H	W	T	S	F	L	K	L	R	L	N	C	S	V	P	G	D	S	T	F	Y	F	D	V


301										311										321										331										341										351										361										371										381										391
L	Q	S	L	T	G	P	V	N	L	H	G	R	S	A	L	F	G	V	F	T	T	Q	T	N	S	I	P	G	S	A	V	C	A	F	Y	L	D	D	I	E	R	G	F	E	G	K	F	K	E	Q	R	S	L	D	G	A	W	T	P	V	S	E	D	K	V	P	S	P	R	P	G	S	C	A	G	V	G	A	A	A	S	F	S	S	S	Q	D	L	P	D	D	V	L	L	F	I	K	A	H


401										411										421										431										441										451										461										471										481										491
P	L	L	D	P	A	V	P	P	A	T	H	Q	P	L	L	T	L	T	S	R	A	L	L	T	Q	V	A	V	D	G	M	A	G	P	H	R	N	T	T	V	L	F	L	G	S	N	D	G	T	V	L	K	V	L	P	P	G	G	Q	S	L	G	S	E	P	I	V	L	E	E	I	D	A	Y	S	H	A	R	C	S	G	K	R	S	P	R	A	A	R	R	I	I	G	L	E	L	D	T	E


501										511										521										531										541										551										561										571										581										591
G	H	R	L	F	V	A	F	P	G	C	I	V	Y	L	S	L	S	R	C	A	R	H	G	A	C	Q	R	S	C	L	A	S	L	D	P	Y	C	G	W	H	R	S	R	G	C	M	S	I	R	G	P	G	G	T	D	V	D	L	T	G	N	Q	E	S	T	E	H	G	D	C	Q	D	G	A	T	G	S	Q	S	G	P	G	D	S	A	Y	G	V	R	R	D	L	S	P	A	S	A	S	R


601										611										621										631										641										651										661										671										681										691
S	I	P	I	P	L	L	L	A	C	V	A	A	A	F	A	L	G	A	S	V	S	G	L	L	V	S	C	A	C	R	R	A	N	R	R	R	S	K	D	I	E	T	P	G	L	P	R	P	L	S	L	R	S	L	A	R	L	H	G	G	G	P	E	P	P	P	P	P	K	D	G	D	A	A	Q	T	P	Q	L	Y	T	T	F	L	P	P	P	D	G	G	S	P	P	E	L	A	C	L	P


701										711										721										731										741										751										761										771										781										791
T	P	E	T	T	P	E	L	P	V	K	H	L	R	A	S	G	G	P	W	E	W	N	Q	N	G	N	N	A	S	E	G	P	G	R	P	P	R	G	C	S	G	A	G	G	P	A	P	R	V	L	V	R	P	P	P	P	G	C	P	G	Q	A	V	E	V	T	T	L	E	E	L	L	R	Y	L	H	G	P	Q	P	P	R	K	G	S	E	P	L	A	S	A	P	F	T	S	R	P	P	A


801										811										821										831										841										851										861										871										881										891
S	E	P	G	A	S	L	F	V	D	S	S	P	M	P	R	D	G	V	P	P	L	R	L	D	V	P	P	E	G	K	R	A	A	P	S	G	R	P	A	L	S	A	P	A	P	R	L	G	V	G	G	S	R	R	L	P	F	P	T	H	R	A	P	P	G	L	L	T	R	V	P	S	G	G	P	A	R	Y	S	G	G	P	G	R	H	L	L	Y	L	G	R	P	E	G	H	R	G	R	S
																																																																						1

901										911										921										931
L	K	R	V	D	V	K	S	P	L	S	P	K	P	P	L	A	S	P	P	Q	P	A	P	H	G	G	H	F	N	F

1										11										21										31										41										51										61										71										81										91
M	P	R	A	P	H	S	M	P	L	L	L	L	L	L	L	L	S	S	L	P	Q	A	Q	A	A	F	P	Q	D	P	T	P	L	L	T	S	D	L	Q	G	A	S	P	S	S	W	F	R	G	L	E	D	D	A	V	A	A	E	L	G	L	D	F	Q	R	F	L	T	L	N	R	T	L	L	V	A	A	R	D	H	V	F	S	F	D	L	Q	A	Q	E	E	G	E	G	L	V	P	N	K


101										111										121										131										141										151										161										171										181										191
F	L	T	W	R	S	Q	D	M	E	N	C	A	V	R	G	K	L	T	D	E	C	Y	N	Y	I	R	V	L	V	P	W	N	S	Q	T	L	L	A	C	G	T	N	S	F	S	P	M	C	R	S	Y	G	I	T	S	L	Q	Q	E	G	E	E	L	S	G	Q	A	R	C	P	F	D	A	T	Q	S	T	V	A	I	F	A	E	G	S	L	Y	S	A	T	A	A	D	F	Q	A	S	D	A


201										211										221										231										241										251										261										271										281										291
V	V	Y	R	S	L	G	P	Q	P	P	L	R	S	A	K	Y	D	S	K	W	L	R	E	P	H	F	V	Y	A	L	E	H	G	E	H	V	Y	F	F	F	R	E	V	S	V	E	D	A	R	L	G	R	V	Q	F	S	R	V	A	R	V	C	K	R	D	M	G	G	S	P	R	A	L	D	R	H	W	T	S	F	L	K	L	R	L	N	C	S	V	P	G	D	S	T	F	Y	F	D	V


301										311										321										331										341										351										361										371										381										391
L	Q	S	L	T	G	P	V	N	L	H	G	R	S	A	L	F	G	V	F	T	T	Q	T	N	S	I	P	G	S	A	V	C	A	F	Y	L	D	D	I	E	R	G	F	E	G	K	F	K	E	Q	R	S	L	D	G	A	W	T	P	V	S	E	D	K	V	P	S	P	R	P	G	S	C	A	G	V	G	A	A	A	S	F	S	S	S	Q	D	L	P	D	D	V	L	L	F	I	K	A	H


401										411										421										431										441										451										461										471										481										491
P	L	L	D	P	A	V	P	P	A	T	H	Q	P	L	L	T	L	T	S	R	A	L	L	T	Q	V	A	V	D	G	M	A	G	P	H	R	N	T	T	V	L	F	L	G	S	N	D	G	T	V	L	K	V	L	P	P	G	G	Q	S	L	G	S	E	P	I	V	L	E	E	I	D	A	Y	S	H	A	R	C	S	G	K	R	S	P	R	A	A	R	R	I	I	G	L	E	L	D	T	E


501										511										521										531										541										551										561										571										581										591
G	H	R	L	F	V	A	F	P	G	C	I	V	Y	L	S	L	S	R	C	A	R	H	G	A	C	Q	R	S	C	L	A	S	L	D	P	Y	C	G	W	H	R	S	R	G	C	M	S	I	R	G	P	G	G	T	D	V	D	L	T	G	N	Q	E	S	T	E	H	G	D	C	Q	D	G	A	T	G	S	Q	S	G	P	G	D	S	A	Y	G	V	R	R	D	L	S	P	A	S	A	S	R


601										611										621										631										641										651										661										671										681										691
S	I	P	I	P	L	L	L	A	C	V	A	A	A	F	A	L	G	A	S	V	S	G	L	L	V	S	C	A	C	R	R	A	N	R	R	R	S	K	D	I	E	T	P	G	L	P	R	P	L	S	L	R	S	L	A	R	L	H	G	G	G	P	E	P	P	P	P	P	K	D	G	D	A	A	Q	T	P	Q	L	Y	T	T	F	L	P	P	P	D	G	G	S	P	P	E	L	A	C	L	P


701										711										721										731										741										751										761										771										781										791
T	P	E	T	T	P	E	L	P	V	K	H	L	R	A	S	G	G	P	W	E	W	N	Q	N	G	N	N	A	S	E	G	P	G	R	P	P	R	G	C	S	G	A	G	G	P	A	P	R	V	L	V	R	P	P	P	P	G	C	P	G	Q	A	V	E	V	T	T	L	E	E	L	L	R	Y	L	H	G	P	Q	P	P	R	K	G	S	E	P	L	A	S	A	P	F	T	S	R	P	P	A


801										811										821										831										841										851										861										871										881										891
S	E	P	G	A	S	L	F	V	D	S	S	P	M	P	R	D	G	V	P	P	L	R	L	D	V	P	P	E	G	K	R	A	A	P	S	G	R	P	A	L	S	A	P	A	P	R	L	G	V	G	G	S	R	R	L	P	F	P	T	H	R	A	P	P	G	L	L	T	R	V	P	S	G	G	P	A	R	Y	S	G	G	P	G	R	H	L	L	Y	L	G	R	P	E	G	H	R	G	R	S
																																																																						1

901										911										921										931
L	K	R	V	D	V	K	S	P	L	S	P	K	P	P	L	A	S	P	P	Q	P	A	P	H	G	G	H	F	N	F