IPI00135464.2: /home/Demos/CPAS/labelfreedemo/demoset

IPI00135464.2

demoset

IPI00135464.2

Run	VARMIX_L_05.pep.xml (Experiment Import - BetaSet.xar)
Sequence Mass	89,822
AA Coverage	1% (6 / 822)
Mass Coverage	1% (500 / 89,822)
Peptides?

Protein Sequence

Detail View

Summary View

Export

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	E	P	T	A	G	S	R	T	R	M	E	P	R	R	N	C	P	T	A	G	T	S	R	M	S	Q	G	A	S	G	G	Q	T	S	G	K	P	E	T	G	V	C	S	L	A	L	P	S	D	L	Q	L	D	R	R	G	A	E	G	P	E	A	D	R	L	R	A	A	R	V	Q	E	Q	V	R	A	R	L	L	Q	L	G	Q	Q	S	R	H	N	G	S	A	E	L	D	G	S	A	E	S


101										111										121										131										141										151										161										171										181										191
A	R	G	M	P	R	G	Q	Y	H	T	M	Q	T	G	F	S	S	R	S	Q	G	M	S	G	D	K	T	S	T	F	R	P	I	A	K	P	A	Y	S	P	A	S	W	S	S	R	S	A	V	D	L	T	C	S	R	R	L	S	S	A	H	N	G	G	S	A	F	G	A	V	G	Y	G	G	T	Q	P	T	P	P	M	P	T	R	P	V	S	F	H	E	R	G	G	A	A	S	R	A	D
																																																																																												3

201										211										221										231										241										251										261										271										281										291
Y	D	T	L	S	L	R	S	L	R	L	G	P	G	G	L	D	D	R	Y	S	V	V	S	E	Q	L	E	P	A	A	A	S	T	Y	R	A	Y	A	Y	E	R	Q	A	S	S	G	S	S	R	A	G	G	L	D	W	P	E	A	T	E	G	P	P	S	R	T	I	R	A	P	A	M	R	T	L	Q	R	F	Q	S	S	H	R	S	R	G	G	T	G	S	V	S	G	A	G	L	E	P	V


301										311										321										331										341										351										361										371										381										391
A	R	A	P	S	V	R	S	L	S	L	S	L	A	D	S	G	H	L	P	D	V	R	G	L	D	S	Y	T	G	H	R	T	L	Q	R	L	S	S	G	F	D	D	I	D	L	P	S	A	V	K	Y	L	M	A	S	D	P	N	L	Q	V	L	G	A	A	Y	I	Q	H	R	C	Y	S	D	A	A	A	K	K	Q	A	R	S	L	Q	A	V	P	R	L	V	K	L	F	N	H	A	N	Q


401										411										421										431										441										451										461										471										481										491
E	V	Q	R	H	A	T	G	A	M	R	N	L	I	Y	D	N	V	D	N	K	L	A	L	V	E	E	N	G	I	F	E	L	L	R	T	L	R	E	Q	D	D	E	L	R	K	N	V	T	G	I	L	W	N	L	S	S	S	D	H	L	K	D	R	L	A	R	D	T	L	E	Q	L	T	D	L	V	L	S	P	L	S	G	A	G	G	P	P	L	I	Q	Q	N	A	S	E	A	E	I	F


501										511										521										531										541										551										561										571										581										591
Y	N	A	T	G	F	L	R	N	L	S	S	A	S	Q	A	T	R	Q	K	M	R	E	C	H	G	L	V	D	A	L	V	T	Y	I	N	H	A	L	D	V	G	K	C	E	D	K	S	V	E	N	A	V	C	V	L	R	N	L	S	Y	R	L	Y	D	E	M	P	P	S	A	L	Q	R	L	E	G	R	G	R	R	D	M	A	G	A	P	P	G	E	M	V	G	C	F	T	P	Q	S	R


601										611										621										631										641										651										661										671										681										691
R	L	R	E	L	P	L	T	A	D	A	L	T	F	A	E	V	S	K	D	P	K	G	L	E	W	L	W	S	P	Q	I	V	G	L	Y	N	R	L	L	Q	R	C	E	L	N	R	H	T	T	E	A	A	A	G	A	L	Q	N	I	T	A	G	D	R	R	W	A	G	V	L	S	R	L	A	L	E	Q	E	R	I	L	N	P	L	L	D	R	V	R	T	A	D	H	N	Q	L	R	S	L


701										711										721										731										741										751										761										771										781										791
T	G	L	I	R	N	L	S	R	N	A	R	N	K	D	E	M	S	T	K	V	V	S	H	L	I	E	K	L	P	G	S	V	G	E	K	C	P	P	A	E	V	L	V	N	I	I	A	V	L	N	N	L	V	V	A	S	P	I	A	A	R	D	L	L	Y	F	D	G	L	R	K	L	V	F	I	K	K	K	R	D	S	P	D	S	E	K	S	S	R	A	A	S	S	L	L	A	N	L	W


801										811										821
Q	Y	S	K	L	H	R	D	F	R	A	K	G	Y	R	K	E	D	F	L	G	P

Annotations for IPI00135464.2

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
none loaded	none loaded	Q9QY23-2	none loaded	ENSMUSP00000101654	IPI00135464	none loaded

Peptides

Peptide Filter:	(SeqId = 287360)
Peptide Sort:
Peptide Counts:	3 total, 1 distinct

Scan Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Hyper Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Next Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Expect Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Ion% Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	CalcMH+ Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	dMass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	PepProphet Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	SeqHits Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Protein Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
1901	1+	150.000	146.000	220.000	60%	518.2680	+0.8710	0.0872	R.GGAASR.A	2	IPI00135464.2
1905	1+	148.000	146.000	120.000	50%	518.2680	+0.8710	0.0601	R.GGAASR.A	2	IPI00135464.2
1957	1+	151.000	147.000	93.000	50%	518.2680	+0.8700	0.0892	R.GGAASR.A	2	IPI00135464.2

Description	IPI:IPI00135464.2\|SWISS-PROT:Q9QY23-2\|ENSEMBL:ENSMUSP00000101654 Tax_Id=10090 Gene_Symbol=Pkp3 Isoform 2 of Plakophilin-3
Gene name	Pkp3
Organism	Mus musculus

LabKey Support

LabKey Support

IPI00135464.2

IPI00135464.2

Protein Sequence

Annotations for IPI00135464.2

Peptides

1										11										21										31										41										51										61										71										81										91
M	E	P	T	A	G	S	R	T	R	M	E	P	R	R	N	C	P	T	A	G	T	S	R	M	S	Q	G	A	S	G	G	Q	T	S	G	K	P	E	T	G	V	C	S	L	A	L	P	S	D	L	Q	L	D	R	R	G	A	E	G	P	E	A	D	R	L	R	A	A	R	V	Q	E	Q	V	R	A	R	L	L	Q	L	G	Q	Q	S	R	H	N	G	S	A	E	L	D	G	S	A	E	S


101										111										121										131										141										151										161										171										181										191
A	R	G	M	P	R	G	Q	Y	H	T	M	Q	T	G	F	S	S	R	S	Q	G	M	S	G	D	K	T	S	T	F	R	P	I	A	K	P	A	Y	S	P	A	S	W	S	S	R	S	A	V	D	L	T	C	S	R	R	L	S	S	A	H	N	G	G	S	A	F	G	A	V	G	Y	G	G	T	Q	P	T	P	P	M	P	T	R	P	V	S	F	H	E	R	G	G	A	A	S	R	A	D
																																																																																												3

201										211										221										231										241										251										261										271										281										291
Y	D	T	L	S	L	R	S	L	R	L	G	P	G	G	L	D	D	R	Y	S	V	V	S	E	Q	L	E	P	A	A	A	S	T	Y	R	A	Y	A	Y	E	R	Q	A	S	S	G	S	S	R	A	G	G	L	D	W	P	E	A	T	E	G	P	P	S	R	T	I	R	A	P	A	M	R	T	L	Q	R	F	Q	S	S	H	R	S	R	G	G	T	G	S	V	S	G	A	G	L	E	P	V


301										311										321										331										341										351										361										371										381										391
A	R	A	P	S	V	R	S	L	S	L	S	L	A	D	S	G	H	L	P	D	V	R	G	L	D	S	Y	T	G	H	R	T	L	Q	R	L	S	S	G	F	D	D	I	D	L	P	S	A	V	K	Y	L	M	A	S	D	P	N	L	Q	V	L	G	A	A	Y	I	Q	H	R	C	Y	S	D	A	A	A	K	K	Q	A	R	S	L	Q	A	V	P	R	L	V	K	L	F	N	H	A	N	Q


401										411										421										431										441										451										461										471										481										491
E	V	Q	R	H	A	T	G	A	M	R	N	L	I	Y	D	N	V	D	N	K	L	A	L	V	E	E	N	G	I	F	E	L	L	R	T	L	R	E	Q	D	D	E	L	R	K	N	V	T	G	I	L	W	N	L	S	S	S	D	H	L	K	D	R	L	A	R	D	T	L	E	Q	L	T	D	L	V	L	S	P	L	S	G	A	G	G	P	P	L	I	Q	Q	N	A	S	E	A	E	I	F


501										511										521										531										541										551										561										571										581										591
Y	N	A	T	G	F	L	R	N	L	S	S	A	S	Q	A	T	R	Q	K	M	R	E	C	H	G	L	V	D	A	L	V	T	Y	I	N	H	A	L	D	V	G	K	C	E	D	K	S	V	E	N	A	V	C	V	L	R	N	L	S	Y	R	L	Y	D	E	M	P	P	S	A	L	Q	R	L	E	G	R	G	R	R	D	M	A	G	A	P	P	G	E	M	V	G	C	F	T	P	Q	S	R


601										611										621										631										641										651										661										671										681										691
R	L	R	E	L	P	L	T	A	D	A	L	T	F	A	E	V	S	K	D	P	K	G	L	E	W	L	W	S	P	Q	I	V	G	L	Y	N	R	L	L	Q	R	C	E	L	N	R	H	T	T	E	A	A	A	G	A	L	Q	N	I	T	A	G	D	R	R	W	A	G	V	L	S	R	L	A	L	E	Q	E	R	I	L	N	P	L	L	D	R	V	R	T	A	D	H	N	Q	L	R	S	L


701										711										721										731										741										751										761										771										781										791
T	G	L	I	R	N	L	S	R	N	A	R	N	K	D	E	M	S	T	K	V	V	S	H	L	I	E	K	L	P	G	S	V	G	E	K	C	P	P	A	E	V	L	V	N	I	I	A	V	L	N	N	L	V	V	A	S	P	I	A	A	R	D	L	L	Y	F	D	G	L	R	K	L	V	F	I	K	K	K	R	D	S	P	D	S	E	K	S	S	R	A	A	S	S	L	L	A	N	L	W


801										811										821
Q	Y	S	K	L	H	R	D	F	R	A	K	G	Y	R	K	E	D	F	L	G	P

1										11										21										31										41										51										61										71										81										91
M	E	P	T	A	G	S	R	T	R	M	E	P	R	R	N	C	P	T	A	G	T	S	R	M	S	Q	G	A	S	G	G	Q	T	S	G	K	P	E	T	G	V	C	S	L	A	L	P	S	D	L	Q	L	D	R	R	G	A	E	G	P	E	A	D	R	L	R	A	A	R	V	Q	E	Q	V	R	A	R	L	L	Q	L	G	Q	Q	S	R	H	N	G	S	A	E	L	D	G	S	A	E	S


101										111										121										131										141										151										161										171										181										191
A	R	G	M	P	R	G	Q	Y	H	T	M	Q	T	G	F	S	S	R	S	Q	G	M	S	G	D	K	T	S	T	F	R	P	I	A	K	P	A	Y	S	P	A	S	W	S	S	R	S	A	V	D	L	T	C	S	R	R	L	S	S	A	H	N	G	G	S	A	F	G	A	V	G	Y	G	G	T	Q	P	T	P	P	M	P	T	R	P	V	S	F	H	E	R	G	G	A	A	S	R	A	D
																																																																																												3

201										211										221										231										241										251										261										271										281										291
Y	D	T	L	S	L	R	S	L	R	L	G	P	G	G	L	D	D	R	Y	S	V	V	S	E	Q	L	E	P	A	A	A	S	T	Y	R	A	Y	A	Y	E	R	Q	A	S	S	G	S	S	R	A	G	G	L	D	W	P	E	A	T	E	G	P	P	S	R	T	I	R	A	P	A	M	R	T	L	Q	R	F	Q	S	S	H	R	S	R	G	G	T	G	S	V	S	G	A	G	L	E	P	V


301										311										321										331										341										351										361										371										381										391
A	R	A	P	S	V	R	S	L	S	L	S	L	A	D	S	G	H	L	P	D	V	R	G	L	D	S	Y	T	G	H	R	T	L	Q	R	L	S	S	G	F	D	D	I	D	L	P	S	A	V	K	Y	L	M	A	S	D	P	N	L	Q	V	L	G	A	A	Y	I	Q	H	R	C	Y	S	D	A	A	A	K	K	Q	A	R	S	L	Q	A	V	P	R	L	V	K	L	F	N	H	A	N	Q


401										411										421										431										441										451										461										471										481										491
E	V	Q	R	H	A	T	G	A	M	R	N	L	I	Y	D	N	V	D	N	K	L	A	L	V	E	E	N	G	I	F	E	L	L	R	T	L	R	E	Q	D	D	E	L	R	K	N	V	T	G	I	L	W	N	L	S	S	S	D	H	L	K	D	R	L	A	R	D	T	L	E	Q	L	T	D	L	V	L	S	P	L	S	G	A	G	G	P	P	L	I	Q	Q	N	A	S	E	A	E	I	F


501										511										521										531										541										551										561										571										581										591
Y	N	A	T	G	F	L	R	N	L	S	S	A	S	Q	A	T	R	Q	K	M	R	E	C	H	G	L	V	D	A	L	V	T	Y	I	N	H	A	L	D	V	G	K	C	E	D	K	S	V	E	N	A	V	C	V	L	R	N	L	S	Y	R	L	Y	D	E	M	P	P	S	A	L	Q	R	L	E	G	R	G	R	R	D	M	A	G	A	P	P	G	E	M	V	G	C	F	T	P	Q	S	R


601										611										621										631										641										651										661										671										681										691
R	L	R	E	L	P	L	T	A	D	A	L	T	F	A	E	V	S	K	D	P	K	G	L	E	W	L	W	S	P	Q	I	V	G	L	Y	N	R	L	L	Q	R	C	E	L	N	R	H	T	T	E	A	A	A	G	A	L	Q	N	I	T	A	G	D	R	R	W	A	G	V	L	S	R	L	A	L	E	Q	E	R	I	L	N	P	L	L	D	R	V	R	T	A	D	H	N	Q	L	R	S	L


701										711										721										731										741										751										761										771										781										791
T	G	L	I	R	N	L	S	R	N	A	R	N	K	D	E	M	S	T	K	V	V	S	H	L	I	E	K	L	P	G	S	V	G	E	K	C	P	P	A	E	V	L	V	N	I	I	A	V	L	N	N	L	V	V	A	S	P	I	A	A	R	D	L	L	Y	F	D	G	L	R	K	L	V	F	I	K	K	K	R	D	S	P	D	S	E	K	S	S	R	A	A	S	S	L	L	A	N	L	W


801										811										821
Q	Y	S	K	L	H	R	D	F	R	A	K	G	Y	R	K	E	D	F	L	G	P

1										11										21										31										41										51										61										71										81										91
M	E	P	T	A	G	S	R	T	R	M	E	P	R	R	N	C	P	T	A	G	T	S	R	M	S	Q	G	A	S	G	G	Q	T	S	G	K	P	E	T	G	V	C	S	L	A	L	P	S	D	L	Q	L	D	R	R	G	A	E	G	P	E	A	D	R	L	R	A	A	R	V	Q	E	Q	V	R	A	R	L	L	Q	L	G	Q	Q	S	R	H	N	G	S	A	E	L	D	G	S	A	E	S


101										111										121										131										141										151										161										171										181										191
A	R	G	M	P	R	G	Q	Y	H	T	M	Q	T	G	F	S	S	R	S	Q	G	M	S	G	D	K	T	S	T	F	R	P	I	A	K	P	A	Y	S	P	A	S	W	S	S	R	S	A	V	D	L	T	C	S	R	R	L	S	S	A	H	N	G	G	S	A	F	G	A	V	G	Y	G	G	T	Q	P	T	P	P	M	P	T	R	P	V	S	F	H	E	R	G	G	A	A	S	R	A	D
																																																																																												3

201										211										221										231										241										251										261										271										281										291
Y	D	T	L	S	L	R	S	L	R	L	G	P	G	G	L	D	D	R	Y	S	V	V	S	E	Q	L	E	P	A	A	A	S	T	Y	R	A	Y	A	Y	E	R	Q	A	S	S	G	S	S	R	A	G	G	L	D	W	P	E	A	T	E	G	P	P	S	R	T	I	R	A	P	A	M	R	T	L	Q	R	F	Q	S	S	H	R	S	R	G	G	T	G	S	V	S	G	A	G	L	E	P	V


301										311										321										331										341										351										361										371										381										391
A	R	A	P	S	V	R	S	L	S	L	S	L	A	D	S	G	H	L	P	D	V	R	G	L	D	S	Y	T	G	H	R	T	L	Q	R	L	S	S	G	F	D	D	I	D	L	P	S	A	V	K	Y	L	M	A	S	D	P	N	L	Q	V	L	G	A	A	Y	I	Q	H	R	C	Y	S	D	A	A	A	K	K	Q	A	R	S	L	Q	A	V	P	R	L	V	K	L	F	N	H	A	N	Q


401										411										421										431										441										451										461										471										481										491
E	V	Q	R	H	A	T	G	A	M	R	N	L	I	Y	D	N	V	D	N	K	L	A	L	V	E	E	N	G	I	F	E	L	L	R	T	L	R	E	Q	D	D	E	L	R	K	N	V	T	G	I	L	W	N	L	S	S	S	D	H	L	K	D	R	L	A	R	D	T	L	E	Q	L	T	D	L	V	L	S	P	L	S	G	A	G	G	P	P	L	I	Q	Q	N	A	S	E	A	E	I	F


501										511										521										531										541										551										561										571										581										591
Y	N	A	T	G	F	L	R	N	L	S	S	A	S	Q	A	T	R	Q	K	M	R	E	C	H	G	L	V	D	A	L	V	T	Y	I	N	H	A	L	D	V	G	K	C	E	D	K	S	V	E	N	A	V	C	V	L	R	N	L	S	Y	R	L	Y	D	E	M	P	P	S	A	L	Q	R	L	E	G	R	G	R	R	D	M	A	G	A	P	P	G	E	M	V	G	C	F	T	P	Q	S	R


601										611										621										631										641										651										661										671										681										691
R	L	R	E	L	P	L	T	A	D	A	L	T	F	A	E	V	S	K	D	P	K	G	L	E	W	L	W	S	P	Q	I	V	G	L	Y	N	R	L	L	Q	R	C	E	L	N	R	H	T	T	E	A	A	A	G	A	L	Q	N	I	T	A	G	D	R	R	W	A	G	V	L	S	R	L	A	L	E	Q	E	R	I	L	N	P	L	L	D	R	V	R	T	A	D	H	N	Q	L	R	S	L


701										711										721										731										741										751										761										771										781										791
T	G	L	I	R	N	L	S	R	N	A	R	N	K	D	E	M	S	T	K	V	V	S	H	L	I	E	K	L	P	G	S	V	G	E	K	C	P	P	A	E	V	L	V	N	I	I	A	V	L	N	N	L	V	V	A	S	P	I	A	A	R	D	L	L	Y	F	D	G	L	R	K	L	V	F	I	K	K	K	R	D	S	P	D	S	E	K	S	S	R	A	A	S	S	L	L	A	N	L	W


801										811										821
Q	Y	S	K	L	H	R	D	F	R	A	K	G	Y	R	K	E	D	F	L	G	P