IPI00129025.1: /home/Demos/CPAS/labelfreedemo/ms1ms2matching

IPI00129025.1

ms1ms2matching

IPI00129025.1

Run	VARMIX_C_04.pep.xml (VARMIX_C/VARMIX_C_04 (Kscorev5copy))
Sequence Mass	59,042
AA Coverage	1% (7 / 552)
Mass Coverage	1% (692 / 59,042)
Peptides?

Protein Sequence

Detail View

Summary View

Export

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	A	G	G	D	G	M	L	R	R	L	L	R	L	H	R	T	E	I	A	V	A	I	D	S	A	F	P	L	L	H	A	L	A	D	H	D	V	V	P	E	D	K	F	Q	E	T	L	R	L	K	E	K	E	G	C	P	Q	A	F	H	A	L	L	S	W	L	L	T	R	D	S	G	A	I	L	D	F	W	R	I	L	F	K	D	Y	N	L	E	R	Y	S	R	L	H	S	I	L	D	G


101										111										121										131										141										151										161										171										181										191
F	P	K	D	V	D	L	N	Q	S	R	K	G	R	K	P	L	A	G	P	K	A	A	V	L	P	P	R	P	P	T	K	R	K	A	L	E	E	P	R	A	T	P	P	A	T	L	A	S	K	S	V	S	S	P	G	S	H	L	K	T	K	P	P	K	K	P	D	G	N	L	E	S	Q	H	L	P	L	G	N	G	I	Q	T	M	A	A	S	V	Q	R	A	V	T	V	A	S	G	D	V
														3

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P	G	T	R	G	A	V	E	G	I	L	I	Q	Q	V	F	E	S	G	R	S	K	K	C	I	Q	V	G	G	E	F	Y	T	P	N	K	F	E	D	P	S	G	N	L	K	N	K	A	R	S	G	S	S	L	K	P	V	V	R	A	K	G	A	Q	V	T	I	P	G	R	D	E	Q	K	V	G	Q	Q	C	G	V	P	P	L	P	S	L	P	S	E	P	Q	V	N	Q	K	N	E	D	E


301										311										321										331										341										351										361										371										381										391
C	A	V	C	H	D	G	G	E	L	I	C	C	D	G	C	P	R	A	F	H	L	A	C	L	S	P	P	L	Q	E	I	P	S	G	L	W	R	C	S	C	C	L	Q	G	R	V	Q	Q	N	L	S	Q	P	E	V	S	R	P	P	E	L	P	A	E	T	P	I	L	V	G	L	R	S	A	S	E	K	T	R	G	P	S	R	E	L	K	A	S	S	D	A	A	V	T	Y	V	N	L	L


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A	P	H	P	A	A	P	L	L	E	P	S	A	L	C	P	L	L	S	A	G	N	E	G	R	P	G	P	A	P	S	A	R	C	S	V	C	G	D	G	T	E	V	L	R	C	A	H	C	A	A	A	F	H	W	R	C	H	F	P	T	A	A	A	R	P	G	T	N	L	R	C	K	S	C	S	A	D	S	T	P	T	P	G	T	P	G	E	A	V	P	T	S	G	P	R	P	A	P	G


501										511										521										531										541										551
L	A	K	V	G	D	D	S	A	S	H	D	P	V	L	H	R	D	D	L	E	S	L	L	N	E	H	S	F	D	G	I	L	Q	W	A	I	Q	S	M	S	R	P	L	A	E	T	P	P	F	S	S

Annotations for IPI00129025.1

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
NP_033776	none loaded	Q9Z0E3-1	none loaded	ENSMUSP00000019257	IPI00129025	none loaded

Peptides

Peptide Filter:	(SeqId = 227671)
Peptide Sort:
Peptide Counts:	3 total, 1 distinct

Scan Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Hyper Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Next Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	B Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Y Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Expect Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Ion% Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	CalcMH+ Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	dMass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	PepProphet Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	SeqHits Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Protein Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
20	2+	340.000	300.000	1.000	1.000	8.700	75%	710.4560	-0.0360	0.1268	R.KPLAGPK.A	13	IPI00129025.1
113	2+	323.000	274.000	1.000	0.000	4.400	75%	710.4560	-0.0370	0.2085	R.KPLAGPK.A	13	IPI00129025.1
142	2+	334.000	291.000	1.000	0.000	6.300	75%	710.4560	-0.0370	0.1866	R.KPLAGPK.A	13	IPI00129025.1

Description	IPI:IPI00129025.1\|SWISS-PROT:Q9Z0E3-1\|REFSEQ_NP:NP_033776\|ENSEMBL:ENSMUSP00000019257 Tax_Id=10090 Splice Isoform 1a of Autoimmune regulator
Gene name	Aire
Organism	Mus musculus

LabKey Support

LabKey Support

IPI00129025.1

IPI00129025.1

Protein Sequence

Annotations for IPI00129025.1

Peptides

1										11										21										31										41										51										61										71										81										91
M	A	G	G	D	G	M	L	R	R	L	L	R	L	H	R	T	E	I	A	V	A	I	D	S	A	F	P	L	L	H	A	L	A	D	H	D	V	V	P	E	D	K	F	Q	E	T	L	R	L	K	E	K	E	G	C	P	Q	A	F	H	A	L	L	S	W	L	L	T	R	D	S	G	A	I	L	D	F	W	R	I	L	F	K	D	Y	N	L	E	R	Y	S	R	L	H	S	I	L	D	G


101										111										121										131										141										151										161										171										181										191
F	P	K	D	V	D	L	N	Q	S	R	K	G	R	K	P	L	A	G	P	K	A	A	V	L	P	P	R	P	P	T	K	R	K	A	L	E	E	P	R	A	T	P	P	A	T	L	A	S	K	S	V	S	S	P	G	S	H	L	K	T	K	P	P	K	K	P	D	G	N	L	E	S	Q	H	L	P	L	G	N	G	I	Q	T	M	A	A	S	V	Q	R	A	V	T	V	A	S	G	D	V
														3

201										211										221										231										241										251										261										271										281										291
P	G	T	R	G	A	V	E	G	I	L	I	Q	Q	V	F	E	S	G	R	S	K	K	C	I	Q	V	G	G	E	F	Y	T	P	N	K	F	E	D	P	S	G	N	L	K	N	K	A	R	S	G	S	S	L	K	P	V	V	R	A	K	G	A	Q	V	T	I	P	G	R	D	E	Q	K	V	G	Q	Q	C	G	V	P	P	L	P	S	L	P	S	E	P	Q	V	N	Q	K	N	E	D	E


301										311										321										331										341										351										361										371										381										391
C	A	V	C	H	D	G	G	E	L	I	C	C	D	G	C	P	R	A	F	H	L	A	C	L	S	P	P	L	Q	E	I	P	S	G	L	W	R	C	S	C	C	L	Q	G	R	V	Q	Q	N	L	S	Q	P	E	V	S	R	P	P	E	L	P	A	E	T	P	I	L	V	G	L	R	S	A	S	E	K	T	R	G	P	S	R	E	L	K	A	S	S	D	A	A	V	T	Y	V	N	L	L


401										411										421										431										441										451										461										471										481										491
A	P	H	P	A	A	P	L	L	E	P	S	A	L	C	P	L	L	S	A	G	N	E	G	R	P	G	P	A	P	S	A	R	C	S	V	C	G	D	G	T	E	V	L	R	C	A	H	C	A	A	A	F	H	W	R	C	H	F	P	T	A	A	A	R	P	G	T	N	L	R	C	K	S	C	S	A	D	S	T	P	T	P	G	T	P	G	E	A	V	P	T	S	G	P	R	P	A	P	G


501										511										521										531										541										551
L	A	K	V	G	D	D	S	A	S	H	D	P	V	L	H	R	D	D	L	E	S	L	L	N	E	H	S	F	D	G	I	L	Q	W	A	I	Q	S	M	S	R	P	L	A	E	T	P	P	F	S	S

1										11										21										31										41										51										61										71										81										91
M	A	G	G	D	G	M	L	R	R	L	L	R	L	H	R	T	E	I	A	V	A	I	D	S	A	F	P	L	L	H	A	L	A	D	H	D	V	V	P	E	D	K	F	Q	E	T	L	R	L	K	E	K	E	G	C	P	Q	A	F	H	A	L	L	S	W	L	L	T	R	D	S	G	A	I	L	D	F	W	R	I	L	F	K	D	Y	N	L	E	R	Y	S	R	L	H	S	I	L	D	G


101										111										121										131										141										151										161										171										181										191
F	P	K	D	V	D	L	N	Q	S	R	K	G	R	K	P	L	A	G	P	K	A	A	V	L	P	P	R	P	P	T	K	R	K	A	L	E	E	P	R	A	T	P	P	A	T	L	A	S	K	S	V	S	S	P	G	S	H	L	K	T	K	P	P	K	K	P	D	G	N	L	E	S	Q	H	L	P	L	G	N	G	I	Q	T	M	A	A	S	V	Q	R	A	V	T	V	A	S	G	D	V
														3

201										211										221										231										241										251										261										271										281										291
P	G	T	R	G	A	V	E	G	I	L	I	Q	Q	V	F	E	S	G	R	S	K	K	C	I	Q	V	G	G	E	F	Y	T	P	N	K	F	E	D	P	S	G	N	L	K	N	K	A	R	S	G	S	S	L	K	P	V	V	R	A	K	G	A	Q	V	T	I	P	G	R	D	E	Q	K	V	G	Q	Q	C	G	V	P	P	L	P	S	L	P	S	E	P	Q	V	N	Q	K	N	E	D	E


301										311										321										331										341										351										361										371										381										391
C	A	V	C	H	D	G	G	E	L	I	C	C	D	G	C	P	R	A	F	H	L	A	C	L	S	P	P	L	Q	E	I	P	S	G	L	W	R	C	S	C	C	L	Q	G	R	V	Q	Q	N	L	S	Q	P	E	V	S	R	P	P	E	L	P	A	E	T	P	I	L	V	G	L	R	S	A	S	E	K	T	R	G	P	S	R	E	L	K	A	S	S	D	A	A	V	T	Y	V	N	L	L


401										411										421										431										441										451										461										471										481										491
A	P	H	P	A	A	P	L	L	E	P	S	A	L	C	P	L	L	S	A	G	N	E	G	R	P	G	P	A	P	S	A	R	C	S	V	C	G	D	G	T	E	V	L	R	C	A	H	C	A	A	A	F	H	W	R	C	H	F	P	T	A	A	A	R	P	G	T	N	L	R	C	K	S	C	S	A	D	S	T	P	T	P	G	T	P	G	E	A	V	P	T	S	G	P	R	P	A	P	G


501										511										521										531										541										551
L	A	K	V	G	D	D	S	A	S	H	D	P	V	L	H	R	D	D	L	E	S	L	L	N	E	H	S	F	D	G	I	L	Q	W	A	I	Q	S	M	S	R	P	L	A	E	T	P	P	F	S	S

1										11										21										31										41										51										61										71										81										91
M	A	G	G	D	G	M	L	R	R	L	L	R	L	H	R	T	E	I	A	V	A	I	D	S	A	F	P	L	L	H	A	L	A	D	H	D	V	V	P	E	D	K	F	Q	E	T	L	R	L	K	E	K	E	G	C	P	Q	A	F	H	A	L	L	S	W	L	L	T	R	D	S	G	A	I	L	D	F	W	R	I	L	F	K	D	Y	N	L	E	R	Y	S	R	L	H	S	I	L	D	G


101										111										121										131										141										151										161										171										181										191
F	P	K	D	V	D	L	N	Q	S	R	K	G	R	K	P	L	A	G	P	K	A	A	V	L	P	P	R	P	P	T	K	R	K	A	L	E	E	P	R	A	T	P	P	A	T	L	A	S	K	S	V	S	S	P	G	S	H	L	K	T	K	P	P	K	K	P	D	G	N	L	E	S	Q	H	L	P	L	G	N	G	I	Q	T	M	A	A	S	V	Q	R	A	V	T	V	A	S	G	D	V
														3

201										211										221										231										241										251										261										271										281										291
P	G	T	R	G	A	V	E	G	I	L	I	Q	Q	V	F	E	S	G	R	S	K	K	C	I	Q	V	G	G	E	F	Y	T	P	N	K	F	E	D	P	S	G	N	L	K	N	K	A	R	S	G	S	S	L	K	P	V	V	R	A	K	G	A	Q	V	T	I	P	G	R	D	E	Q	K	V	G	Q	Q	C	G	V	P	P	L	P	S	L	P	S	E	P	Q	V	N	Q	K	N	E	D	E


301										311										321										331										341										351										361										371										381										391
C	A	V	C	H	D	G	G	E	L	I	C	C	D	G	C	P	R	A	F	H	L	A	C	L	S	P	P	L	Q	E	I	P	S	G	L	W	R	C	S	C	C	L	Q	G	R	V	Q	Q	N	L	S	Q	P	E	V	S	R	P	P	E	L	P	A	E	T	P	I	L	V	G	L	R	S	A	S	E	K	T	R	G	P	S	R	E	L	K	A	S	S	D	A	A	V	T	Y	V	N	L	L


401										411										421										431										441										451										461										471										481										491
A	P	H	P	A	A	P	L	L	E	P	S	A	L	C	P	L	L	S	A	G	N	E	G	R	P	G	P	A	P	S	A	R	C	S	V	C	G	D	G	T	E	V	L	R	C	A	H	C	A	A	A	F	H	W	R	C	H	F	P	T	A	A	A	R	P	G	T	N	L	R	C	K	S	C	S	A	D	S	T	P	T	P	G	T	P	G	E	A	V	P	T	S	G	P	R	P	A	P	G


501										511										521										531										541										551
L	A	K	V	G	D	D	S	A	S	H	D	P	V	L	H	R	D	D	L	E	S	L	L	N	E	H	S	F	D	G	I	L	Q	W	A	I	Q	S	M	S	R	P	L	A	E	T	P	P	F	S	S