IPI00553336.3: /home/Demos/CPAS/labelfreedemo/ms1ms2matching

IPI00553336.3

ms1ms2matching

IPI00553336.3

Run	VARMIX_L_03.pep.xml (VARMIX_L/VARMIX_L_03 (Kscorev5copy))
Sequence Mass	165,116
AA Coverage	0% (7 / 1,477)
Mass Coverage	0% (772 / 165,116)
Peptides?

Protein Sequence

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Summary View

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The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	G	P	R	K	P	A	L	R	T	P	L	L	L	L	F	L	L	L	F	L	D	T	S	V	W	A	Q	D	E	V	L	E	N	L	S	F	S	C	P	K	D	A	T	R	F	K	H	L	R	K	Y	V	Y	N	Y	E	A	E	S	S	S	G	V	Q	G	T	A	D	S	R	S	A	T	K	I	N	C	K	V	E	L	E	V	P	Q	I	C	G	F	I	M	R	T	N	Q	C	T	L	K


101										111										121										131										141										151										161										171										181										191
E	V	Y	G	F	N	P	E	G	K	A	L	M	K	K	T	K	N	S	E	E	F	A	A	A	M	S	R	Y	E	L	K	L	A	I	P	E	G	K	Q	I	V	L	Y	P	D	K	D	E	P	K	Y	I	L	N	I	K	R	G	I	I	S	A	L	L	V	P	P	E	T	E	E	D	Q	Q	E	L	F	L	D	T	V	Y	G	N	C	S	T	Q	V	T	V	N	S	R	K	G	T	V	P


201										211										221										231										241										251										261										271										281										291
T	E	M	S	T	E	R	N	L	Q	Q	C	D	G	F	Q	P	I	S	T	S	V	S	P	L	A	L	I	K	G	L	V	H	P	L	S	T	L	I	S	S	S	Q	T	C	Q	Y	T	L	D	P	K	R	K	H	V	S	E	A	V	C	D	E	Q	H	L	F	L	P	F	S	Y	K	N	K	Y	G	I	M	T	R	V	T	Q	K	L	S	L	E	D	T	P	K	I	N	S	R	F	F	S


301										311										321										331										341										351										361										371										381										391
E	G	T	N	R	M	G	L	A	F	E	S	T	K	S	T	S	S	P	K	Q	A	D	A	V	L	K	T	L	Q	E	L	K	K	L	S	I	S	E	Q	N	A	Q	R	A	N	L	F	N	K	L	V	T	E	L	R	G	L	T	G	E	A	I	T	S	L	L	P	Q	L	I	E	V	S	S	P	I	T	L	Q	A	L	V	Q	C	G	Q	P	Q	C	Y	T	H	I	L	Q	W	L	K	T


401										411										421										431										441										451										461										471										481										491
E	K	A	H	P	L	L	V	D	I	V	T	Y	L	M	A	L	I	P	N	P	S	T	Q	R	L	Q	E	I	F	N	T	A	K	E	Q	Q	S	R	A	T	L	Y	A	L	S	H	A	V	N	S	Y	F	D	V	D	H	S	R	S	P	V	L	Q	D	I	A	G	Y	L	L	K	Q	I	D	N	E	C	T	G	N	E	D	H	T	F	L	I	L	R	V	I	G	N	M	G	R	T	M	E


501										511										521										531										541										551										561										571										581										591
Q	V	M	P	A	L	K	S	S	V	L	S	C	V	R	S	T	K	P	S	L	L	I	Q	K	A	A	L	Q	A	L	R	K	M	E	L	E	D	E	V	R	T	I	L	F	D	T	F	V	N	G	V	A	P	V	E	K	R	L	A	A	Y	L	L	L	M	K	N	P	S	S	S	D	I	N	K	I	A	Q	L	L	Q	W	E	Q	S	E	Q	V	K	N	F	V	A	S	H	I	A	N	I


601										611										621										631										641										651										661										671										681										691
L	N	S	E	E	L	Y	V	Q	D	L	K	V	L	I	K	N	A	L	E	N	S	Q	F	P	T	I	M	D	F	R	K	F	S	R	N	Y	Q	I	S	K	S	A	S	L	P	M	F	D	P	V	S	V	K	I	E	G	N	L	I	F	D	P	S	S	Y	L	P	R	E	S	L	L	K	T	T	L	T	V	F	G	L	A	S	L	D	L	F	E	I	G	L	E	G	K	G	F	E	P	T


701										711										721										731										741										751										761										771										781										791
L	E	A	L	F	G	K	Q	G	F	F	P	D	S	V	N	K	A	L	Y	W	V	N	G	R	V	P	D	G	V	S	K	V	L	V	D	H	F	G	Y	T	T	D	G	K	H	E	Q	D	M	V	N	G	I	M	P	I	V	D	K	L	I	K	D	L	K	S	K	E	I	P	E	A	R	A	Y	L	R	I	L	G	K	E	L	S	F	V	R	L	Q	D	L	Q	V	L	G	K	L	L	L


801										811										821										831										841										851										861										871										881										891
S	G	A	Q	T	L	Q	G	I	P	Q	M	V	V	Q	A	I	R	E	G	S	K	N	D	L	F	L	H	Y	I	F	M	D	N	A	F	E	L	P	T	G	A	G	L	Q	L	Q	V	S	S	S	G	V	F	T	P	G	I	K	A	G	V	R	L	E	L	A	N	I	Q	A	E	L	V	A	K	P	S	V	S	L	E	F	V	T	N	M	G	I	I	I	P	D	F	A	K	S	S	V	Q


901										911										921										931										941										951										961										971										981										991
M	N	T	N	F	F	H	E	S	G	L	E	A	R	V	A	L	K	A	G	Q	L	K	V	I	I	P	S	P	K	R	P	V	K	L	F	S	G	S	N	T	L	H	L	V	S	T	T	K	T	E	V	I	P	P	L	V	E	N	R	Q	S	W	S	T	C	K	P	L	F	T	G	M	N	Y	C	T	T	G	A	Y	S	N	A	S	S	T	E	S	A	S	Y	Y	P	L	T	G	D	T	R


1001										1011										1021										1031										1041										1051										1061										1071										1081										1091
Y	E	L	E	L	R	P	T	G	E	V	E	Q	Y	S	A	T	A	T	Y	E	L	L	K	E	D	K	S	L	V	D	T	L	K	F	L	V	Q	A	E	G	V	Q	Q	S	E	A	T	V	L	F	K	Y	N	R	R	S	R	T	L	S	S	E	V	L	I	P	G	F	D	V	N	F	G	T	I	L	R	V	N	D	E	S	A	K	D	K	N	T	Y	K	L	I	L	D	I	Q	N	K	K


1101										1111										1121										1131										1141										1151										1161										1171										1181										1191
I	T	E	V	S	L	V	G	H	L	S	Y	D	K	K	G	D	G	K	I	K	G	V	V	S	I	P	R	L	Q	A	E	A	R	S	E	V	H	T	H	W	S	S	T	K	L	L	F	Q	M	D	S	S	A	T	A	Y	G	S	T	I	S	K	R	V	T	W	R	Y	D	N	E	I	I	E	F	D	W	N	T	G	T	N	V	D	T	K	K	V	A	S	N	F	P	V	D	L	S	H	Y


1201										1211										1221										1231										1241										1251										1261										1271										1281										1291
P	R	M	L	H	E	Y	A	N	G	L	L	D	H	R	V	P	Q	T	D	V	T	F	R	D	M	G	S	K	L	I	V	A	T	N	T	W	L	Q	M	A	T	R	G	L	P	Y	P	Q	T	L	Q	D	H	L	N	S	L	S	E	L	N	L	L	K	M	G	L	S	D	F	H	I	P	D	N	L	F	L	K	T	D	G	R	V	K	Y	T	M	N	R	N	K	I	N	I	D	I	P	L


1301										1311										1321										1331										1341										1351										1361										1371										1381										1391
P	L	G	G	K	S	S	K	D	L	K	M	P	E	S	V	R	T	P	A	L	N	F	K	S	V	G	F	H	L	P	S	R	E	V	Q	V	P	T	F	T	I	P	K	T	H	Q	L	Q	V	P	L	L	G	V	L	D	L	S	T	N	V	Y	S	N	L	Y	N	W	S	A	S	Y	T	G	G	N	T	S	R	D	H	F	S	L	Q	A	Q	Y	R	M	K	T	D	S	V	V	D	L	F
																	3

1401										1411										1421										1431										1441										1451										1461										1471
S	Y	S	V	Q	G	S	G	E	T	T	Y	D	S	K	N	T	F	T	L	S	C	D	G	S	L	H	H	K	F	L	D	S	K	F	K	V	S	H	V	E	K	F	G	N	S	P	V	S	K	G	L	L	T	F	E	T	S	S	A	L	G	P	Q	M	S	A	T	V	H	L	D	S	K	K	K	K

Annotations for IPI00553336.3

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
none loaded	none loaded	Q497D8 Q8CGG8	none loaded	ENSMUSP00000036044	IPI00553336	none loaded

Peptides

Peptide Filter:	(SeqId = 291623)
Peptide Sort:
Peptide Counts:	3 total, 1 distinct

Scan Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Hyper Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Next Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	B Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Y Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Expect Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Ion% Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	CalcMH+ Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	dMass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	PepProphet Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	SeqHits Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Protein Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
231	2+	306.000	288.000	1.000	1.000	6.500	42%	790.4458	-0.0030	0.0685	R.TPALNFK.S	2	IPI00553336.3
328	2+	266.000	243.000	0.000	1.000	11.000	50%	790.4458	-0.0040	0.0574	R.TPALNFK.S	2	IPI00553336.3
331	2+	254.000	224.000	0.000	1.000	8.600	58%	790.4458	-0.0030	0.0630	R.TPALNFK.S	2	IPI00553336.3

Description	IPI:IPI00553336.3\|TREMBL:Q497D8;Q8CGG8\|ENSEMBL:ENSMUSP00000036044 Tax_Id=10090 Gene_Symbol=Apob Apob protein (Fragment)
Gene name	Apob
Organism	Mus musculus

LabKey Support

LabKey Support

IPI00553336.3

IPI00553336.3

Protein Sequence

Annotations for IPI00553336.3

Peptides