Protocol: Flow

Peptide Validation
Name Flow
Contact
Instrument
Software
Description
Max input data per instance
Max input material per instance
Output data per instance
Output material per instance
FCSAnalysisFilter: Keyword%2FStim~neqornull=Comp&Keyword%2FStim~neqornull=PBS
FCSAnalysisName: ${Keyword/Sample Order}-${Keyword/Stim}
ICSMetadata: <ICSMetadata xmlns="http://flow.labkey.org/icsmetadata/xml/" xmlns:ns="http://cpas.fhcrc.org/flow/script/xml"> <background> <matchColumns> <field>Run</field> <field>FCSFile/Keyword/Sample Order</field> </matchColumns> <backgroundColumn> <ns:field>FCSFile/Keyword/Stim</ns:field> <ns:op>eq</ns:op> <ns:value>Neg Cont</ns:value> </backgroundColumn> </background> </ICSMetadata>
ProtocolImplementation: flow
SampleSetJoin: LSR%20Exp%20Name=Run%2FName&SAMP_ORD=Keyword%2FSample%20Order
SampleSetLSID: urn:lsid:cpas.fhcrc.org:SampleSet.Folder-485:Samples
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Material Inputs
Data Inputs
Material Outputs
Data Outputs
Protocol Steps
Step Name Description
0 Flow
10 Keywords Read a directory containing FCS files
20 Compensation Calculate the compensation matrix
25 DefineGates Define Gates
30 Analysis Calculate statistics and generate graphs for Flow Data
1000 MarkRunOutputData
 
L02-060329-PV1-R1 analysis2008-11-17 19:48Matthew BellewFlowFlowAnalysis
L02-060329-PV1-R1 comp2008-11-17 19:01Matthew BellewFlowFlowAnalysis
L02-060417-PV1-R1 analysis2008-11-17 18:53Matthew BellewFlowFlowAnalysis
L02-060417-PV1-R1 comp2008-11-17 18:09Matthew BellewFlowFlowAnalysis
L02-060414-PV1-R1 analysis2008-11-17 18:02Matthew BellewFlowFlowAnalysis
L02-060414-PV1-R1 comp2008-11-17 17:21Matthew BellewFlowFlowAnalysis
L02-060413-PV1-R1 analysis2008-11-17 17:14Matthew BellewFlowFlowAnalysis
L02-060413-PV1-R1 comp2008-11-17 16:30Matthew BellewFlowFlowAnalysis
L02-060410-PV1-R1 analysis2008-11-17 16:21Matthew BellewFlowFlowAnalysis
L02-060410-PV1-R1 comp2008-11-17 15:34Matthew BellewFlowFlowAnalysis
L02-060407-PV1-R1 analysis2008-11-17 15:25Matthew BellewFlowFlowAnalysis
L02-060407-PV1-R1 comp2008-11-17 14:39Matthew BellewFlowFlowAnalysis
L02-060406-PV1-R1 analysis2008-11-17 14:31Matthew BellewFlowFlowAnalysis
L02-060406-PV1-R1 comp2008-11-17 13:45Matthew BellewFlowFlowAnalysis
L02-060405-PV1-R1 analysis2008-11-17 13:38Matthew BellewFlowFlowAnalysis
L02-060405-PV1-R1 comp2008-11-17 12:54Matthew BellewFlowFlowAnalysis
L02-060403-PV1-R1 analysis2008-11-17 12:46Matthew BellewFlowFlowAnalysis
L02-060403-PV1-R1 comp2008-11-17 11:55Matthew BellewFlowFlowAnalysis
L02-060331-PV1-R1 analysis2008-11-17 11:48Matthew BellewFlowFlowAnalysis
L02-060331-PV1-R1 comp2008-11-17 11:02Matthew BellewFlowFlowAnalysis
L02-060330-PV1-R1 analysis2008-11-17 10:54Matthew BellewFlowFlowAnalysis
L02-060330-PV1-R1 comp2008-11-17 10:04Matthew BellewFlowFlowAnalysis
L02-060417-PV1-R12007-09-10 13:32nickshFlowFlow Experiment Runs
L02-060414-PV1-R12007-09-10 13:32nickshFlowFlow Experiment Runs
L02-060413-PV1-R12007-09-10 13:31nickshFlowFlow Experiment Runs
L02-060410-PV1-R12007-09-10 13:31nickshFlowFlow Experiment Runs
L02-060407-PV1-R12007-09-10 13:31nickshFlowFlow Experiment Runs
L02-060406-PV1-R12007-09-10 13:31nickshFlowFlow Experiment Runs
L02-060405-PV1-R12007-09-10 13:30nickshFlowFlow Experiment Runs
L02-060403-PV1-R12007-09-10 13:30nickshFlowFlow Experiment Runs
L02-060331-PV1-R12007-09-10 13:30nickshFlowFlow Experiment Runs
L02-060330-PV1-R12007-09-10 13:29nickshFlowFlow Experiment Runs
L02-060329-PV1-R12007-09-10 13:29nickshFlowFlow Experiment Runs