| | | | | | | | | | | | | | 4-CMV |
| L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 280,306 | 270,615 | 96.543 | 252,615 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-CMV | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 278,746 | 269,695 | 96.753 | 249,838 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-CMV | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 255,632 | 245,121 | 95.888 | 186,243 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-CMV | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 291,954 | 282,131 | 96.635 | 255,951 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-CMV | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 216,112 | 210,127 | 97.231 | 186,664 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 9-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 247,624 | 239,031 | 96.53 | 217,428 | 248,443 | 240,147 | 96.66 | 218,309 |
| 9-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 249,262 | 241,263 | 96.791 | 219,190 | 248,443 | 240,147 | 96.66 | 218,309 |
| 9-CMV | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 263,068 | 253,930 | 96.526 | 230,388 | 248,443 | 240,147 | 96.66 | 218,309 |
| 9-SEB | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 234,078 | 226,831 | 96.904 | 204,267 | 248,443 | 240,147 | 96.66 | 218,309 |
| 1-SEB | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 204,750 | 199,140 | 97.26 | 179,294 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-SEB | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 147,030 | 143,567 | 97.645 | 121,246 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-SEB | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 204,828 | 199,618 | 97.456 | 174,573 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-SEB | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 253,812 | 246,884 | 97.27 | 231,119 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-SEB | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 256,152 | 249,283 | 97.318 | 230,300 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-SEB | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 227,058 | 218,699 | 96.319 | 172,011 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-SEB | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 249,548 | 242,523 | 97.185 | 220,154 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-SEB | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 158,522 | 154,926 | 97.732 | 137,551 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 230,282 | 224,636 | 97.548 | 201,934 | 244,400 | 238,285 | 97.501 | 214,508 |
| 1-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 258,518 | 251,934 | 97.453 | 227,082 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 162,838 | 159,881 | 98.184 | 136,373 | 168,896 | 165,909 | 98.23 | 141,477 |
| 2-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 174,954 | 171,937 | 98.276 | 146,581 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 210,496 | 206,245 | 97.98 | 177,081 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 3-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 235,404 | 231,009 | 98.133 | 202,638 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 243,828 | 238,638 | 97.871 | 220,696 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 4-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 281,034 | 275,314 | 97.965 | 255,335 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 253,786 | 248,379 | 97.869 | 227,477 | 269,568 | 263,823 | 97.869 | 243,089 |
| 5-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 285,350 | 279,267 | 97.868 | 258,701 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 251,316 | 244,566 | 97.314 | 188,532 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 6-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 251,030 | 244,605 | 97.441 | 190,918 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 248,742 | 243,405 | 97.854 | 217,850 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 7-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 262,392 | 256,856 | 97.89 | 232,450 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 197,626 | 193,820 | 98.074 | 170,805 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 8-Neg Cont | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 195,650 | 191,686 | 97.974 | 168,816 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Env1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 185,016 | 177,942 | 96.177 | 138,689 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Env1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 89,648 | 86,355 | 96.327 | 51,677 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Env1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 141,986 | 136,171 | 95.905 | 78,580 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-Env1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 188,500 | 181,045 | 96.045 | 135,404 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-Env1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 166,192 | 159,237 | 95.815 | 113,169 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-Env1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 179,010 | 171,877 | 96.015 | 99,897 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-Env1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 177,658 | 169,718 | 95.531 | 113,335 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-Env1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 137,670 | 131,497 | 95.516 | 80,155 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Env2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 189,176 | 180,258 | 95.286 | 120,347 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Env2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 106,678 | 102,687 | 96.259 | 57,904 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Env2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 174,226 | 166,756 | 95.712 | 100,945 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-Env2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 221,832 | 211,882 | 95.515 | 139,811 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-Env2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 220,090 | 211,195 | 95.958 | 154,151 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-Env2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 214,552 | 205,567 | 95.812 | 113,439 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-Env2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 220,896 | 211,567 | 95.777 | 141,786 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-Env2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 166,712 | 161,155 | 96.667 | 116,707 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Env3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 214,604 | 205,771 | 95.884 | 147,778 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Env3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 113,695 | 109,585 | 96.385 | 66,643 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Env3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 172,042 | 165,521 | 96.21 | 102,005 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-Env3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 216,814 | 207,971 | 95.921 | 141,761 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-Env3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 194,142 | 185,961 | 95.786 | 126,822 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-Env3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 201,110 | 192,726 | 95.831 | 105,551 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-Env3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 186,654 | 178,400 | 95.578 | 108,528 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-Env3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 144,352 | 138,626 | 96.033 | 84,426 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Gag1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 233,870 | 227,482 | 97.269 | 203,908 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Gag1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 160,342 | 156,993 | 97.911 | 133,743 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Gag1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 204,360 | 199,948 | 97.841 | 172,835 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-Gag1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 251,394 | 245,319 | 97.583 | 229,269 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-Gag1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 250,640 | 244,708 | 97.633 | 226,602 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-Gag1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 218,842 | 212,325 | 97.022 | 166,170 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-Gag1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 250,406 | 244,310 | 97.566 | 221,040 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-Gag1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 185,068 | 180,945 | 97.772 | 160,324 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Gag2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 223,496 | 215,795 | 96.554 | 193,404 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Gag2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 155,220 | 151,405 | 97.542 | 128,776 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Gag2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 208,052 | 202,346 | 97.257 | 177,115 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-Gag2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 236,600 | 231,065 | 97.661 | 215,326 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-Gag2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 234,676 | 228,271 | 97.271 | 209,400 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-Gag2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 221,858 | 214,581 | 96.72 | 164,460 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-Gag2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 227,396 | 221,061 | 97.214 | 197,133 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-Gag2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 165,230 | 161,313 | 97.629 | 141,169 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Pol1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 263,328 | 253,699 | 96.343 | 228,370 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Pol1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 165,568 | 161,729 | 97.681 | 136,398 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Pol1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 222,222 | 216,465 | 97.409 | 187,516 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-Pol1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 274,872 | 267,498 | 97.317 | 247,391 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-Pol1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 270,712 | 262,969 | 97.14 | 242,140 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-Pol1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 263,588 | 253,676 | 96.24 | 191,048 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-Pol1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 257,946 | 251,422 | 97.471 | 224,981 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-Pol1 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 191,672 | 187,120 | 97.625 | 163,695 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Pol2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 239,954 | 231,396 | 96.433 | 207,308 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Pol2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 187,356 | 182,012 | 97.148 | 154,156 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Pol2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 248,326 | 241,153 | 97.111 | 207,774 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-Pol2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 283,712 | 274,853 | 96.877 | 255,890 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-Pol2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 274,352 | 266,844 | 97.263 | 246,036 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-Pol2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 270,530 | 259,427 | 95.896 | 196,197 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-Pol2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 273,078 | 264,714 | 96.937 | 237,933 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-Pol2 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 199,810 | 194,673 | 97.429 | 171,767 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Pol3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 240,838 | 231,890 | 96.285 | 207,292 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Pol3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 165,022 | 160,506 | 97.263 | 134,616 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Pol3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 249,834 | 242,337 | 96.999 | 208,677 | 222,950 | 218,627 | 98.057 | 189,859.5 |
| 4-Pol3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 278,928 | 269,526 | 96.629 | 248,841 | 262,431 | 256,976 | 97.918 | 238,015.5 |
| 5-Pol3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 272,090 | 263,378 | 96.798 | 241,713 | 269,568 | 263,823 | 97.869 | 243,089 |
| 6-Pol3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 256,594 | 245,695 | 95.752 | 185,281 | 251,173 | 244,585.5 | 97.377 | 189,725 |
| 7-Pol3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 276,614 | 267,231 | 96.608 | 239,206 | 255,567 | 250,130.5 | 97.872 | 225,150 |
| 8-Pol3 | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 195,546 | 190,133 | 97.232 | 167,397 | 196,638 | 192,753 | 98.024 | 169,810.5 |
| 1-Nef | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 246,454 | 236,338 | 95.895 | 210,575 | 244,400 | 238,285 | 97.501 | 214,508 |
| 2-Nef | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 168,792 | 163,623 | 96.938 | 136,636 | 168,896 | 165,909 | 98.23 | 141,477 |
| 3-Nef | | L02-060331-PV1-R1 analysis | L02-060331-PV1-R1 comp matrix | 233,220 | 225,234 | 96.576 | 188,750 | 222,950 | 218,627 | 98.057 | 189,859.5 |
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