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HIV Study Tutorial
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06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

"labkey.log" attached to message "MS SQL Server problem"

INFO ModuleLoader 2015-09-16 10:46:56,502 localhost-startStop-1 : __ || | _ |_ |/ _ (� _ _ _ _ (__) |_(_||_)|\(/_\/ _)(/_| \/(/_| / INFO DbScope 2015-09-16 10:46:58,752 localhost-startStop-1 : Attempting to create database "TEST_LabKey2" INFO DbScope ...

Module Upgrade : Error: Unable to initialize search index.

ALL SITE ERRORS returns me this log file. Can you help me? ERROR LuceneSearchServiceImpl 2021-03-03 09:24:27,258 Module Upgrade : Error: Unable to initialize search index. Search will be disabled and new documents will not be indexed for searching until this is corrected and the server is restarted. java.nio.file.NoSuchFileException: C:\Program Files\Apache Software Foundation\Tomcat...

Sorting fails in MS2 module Compare

Hi, we have just installed a new instance of Labkey server 15.1 with postgres and start to feel out way around. Ran into issue when comparing multiple sets of proteomics data. Selecting few runs and comparing them (any comparison - ProteinProphet, Search Engine, etc. has the same issue) works fine, but when I try to sort on any column, the column returns with blank content - other columns for...

Configuration error deteced at LabKey Server Startup

Hello,   I am trying to install a local LabKey server on a machine running CentOS 6. I went through the installation steps, but am receiving this error when I go to open labkey in my browser. Also, I am only able to start up postgres when I am logged in as root; does this have something to do with the error? I am relatively new to Linux so please bear with me.   org.labkey.api.util.ConfigurationException:...

Creating New Modules

Hi guys, Wondering if I can get any guidance on coding my own module. I've compiled 1.4 from source code, tinkered with the demo module, and taken a look at the build scripts. As a first step, I copied the demo module into another directory in the modules folder and modified the build script: added <antcall target="myModule"/> to "build_module_classes" target 2. added   <target name="myModule"...

study_load_2017-03-01_22-51-53.log

01 Mar 2017 22:51:54,728 INFO : Study reload was initiated by a configured automatic reload timer 01 Mar 2017 22:51:54,730 INFO : User "Bernard" is configured as the reload user for this study. This can be changed by visiting the "Manage Reloading" page. 01 Mar 2017 22:51:54,788 INFO : Starting to run task 'org.labkey.study.importer.StudyImportInitialTask' at location 'webserver' 01 Mar 2017 22:51:54,791...

"QuerySnapshotCreationError.txt" attached to message "Cannot create query snapshot with large number of columns in 14.1"

500: Unexpected server error SqlExecutor.execute(); SQL []; ERROR: functions cannot have more than 100 arguments; nested exception is org.postgresql.util.PSQLException: ERROR: functions cannot have more than 100 arguments org.springframework.dao.DataAccessResourceFailureException: SqlExecutor.execute(); SQL []; ERROR: functions cannot have more than 100 arguments; nested exception is org.postgresql.util.PSQLException:...

"getContainers-atlas-test.txt" attached to message "Strange behavior with LABKEY.Security.getContainers() function"

https://atlas-test.scharp.org/cpas/project/HVTN/Specimen%20Management/Lab%20Program/begin.view? https://atlas-test.scharp.org/cpas/project/HVTN/getContainers.view?_dc=1348616911600&container=%2FHVTN%2FSpecimen%20Management%2FLab%20Program%2F&includeSubfolders=false _dc=1348616911600 container=/HVTN/Specimen Management/Lab Program/ includeSubfolders=false { "sortOrder": 0, "children": [...

lin_384_well_metadata.xls

data SampleWellGroup PlateLocation SpecimenID ParticipantID VisitID Date SampleDescription Lot Number InitialDilution Factor Method Specimen 1 A3-A4 4E10 Antibody Lot 1 10 3 Concentration Specimen 2 B3-B4 2F5 Antibody Lot 1 10 3 Concentration Specimen 3 C3-C4 2G12 Antibody Lot 1 10 3 Concentration Specimen 4 D3-D4 sCD4 Antibody Lot 1 10 3 Concentration Specimen 5 E3-E4 HIVIG Antibody...

Error when upgrading

I'm trying to upgrade our prod Labkey docker instance from 23.3.2 to 23.11.11. The upgrade went ok on our dev instance but the upgrade fails every time when we try on prod, leaving things in a broken state so we have to roll back the database. I've done the database check via the UI and no issues are found. The issue seems to be related to the Experiment module : INFO ModuleLoader ...

"labkey.log" attached to message "Error while running trigger script"

INFO ScriptService$Console 2020-04-07 17:59:07,547 io-127.0.0.1-8080-exec-4 : ** evaluating: queries/study/BasicsCase.js INFO ScriptService$Console 2020-04-07 17:59:07,584 io-127.0.0.1-8080-exec-4 : Getting entries in BasicsCase, success: 33 rows returned. INFO ScriptService$Console 2020-04-07 17:59:07,584 io-127.0.0.1-8080-exec-4 : Selected rows BasicsCase: INFO ScriptService$Console...

"Physical Exam doesnt work.xls" attached to message "Unable to import dates"

data ParticipantID Date SystolicBloodPressure DiastolicBloodPressure Pulse Respirations Height Weight ARVRegimenType Pregnancy Language Signature 133428 2008-08-15 131 91 72 16 165 67.5 NVP-XR English 133428 2008-10-10 145 104 67 19 165 83.5 NVP-XR English 133428 2009-09-11 132 114 66 12 165 89.5 NVP-XR English 133428 2009-11-06 163 90 76 14 165 71.5 NVP-XR English 133428 2009-12-04 164...

500: Unexpected server error

I am trying to do an express install on Windows xp and received the following error 500: Unexpected server error java.lang.reflect.InvocationTargetException [Show more details] java.lang.RuntimeException: java.lang.reflect.InvocationTargetException        at org.fhcrc.cpas.util.BoundMap.get(BoundMap.java:89)        at org.fhcrc.cpas.view.GroovyView.createModelBinding(GroovyView.java:475)...

01-11A12-IgA-Biotin-1.xls

ENV1 (31) File Name: 01-11A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12 Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12 Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12 Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...