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HIV Study Tutorial
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Sample ID Naming

Each sample in the system must have a unique name/id within its Sample Type. The unique sample names can be provided by the user, or can be generated by the system. When you ask the system to generate names, you specify a naming pattern to use. For each type of sample, you will choose one of these two options. If you already use a unique naming structure outside the system, you will want to ensure...

HIV Disease Progression - Demo Study-Lab Results-2019-04-11-09492.tsv

ParticipantId sourcelsid date Day DataSets/Demographics/Gender oldcd4 Lymphocytes Hemoglobin DataSets/Demographics/Group DataSets/Demographics/TreatmentGroup CD4 119180 4/20/2008 0 f 239 1802 17 Group 1: Acute HIV-1 No ARV 120 119180 5/18/2008 28 f 266 1787 18 Group 1: Acute HIV-1 No ARV 133 119180 6/15/2008 56 f 224 1843 19 Group 1: Acute HIV-1 No ARV 112 119180 7/13/2008 84 f 163 1780 17 Group...

07-12A81-IgA-Biotin.xls

ENV1 (31) File Name: 07-12A81-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 25-Jun-2011, 01:21 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 07-12A81 Signed By: Steve Hanson Document ID: 9996 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

07-12A81-IgA-Biotin.xls

ENV1 (31) File Name: 07-12A81-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 25-Jun-2011, 01:21 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 07-12A81 Signed By: Steve Hanson Document ID: 9996 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

07-12A81-IgA-Biotin.xls

ENV1 (31) File Name: 07-12A81-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 25-Jun-2011, 01:21 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 07-12A81 Signed By: Steve Hanson Document ID: 9996 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

07-12A81-IgA-Biotin.xls

ENV1 (31) File Name: 07-12A81-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 25-Jun-2011, 01:21 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 07-12A81 Signed By: Steve Hanson Document ID: 9996 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

HIV Disease Progression - Demo Study-Lab Results-2019-04-11-0949.tsv

ParticipantId sourcelsid date Day DataSets/Demographics/Gender oldcd4 Lymphocytes Hemoglobin DataSets/Demographics/Group DataSets/Demographics/TreatmentGroup CD4 119180 4/20/2008 0 f 239 1802 17 Group 1: Acute HIV-1 No ARV 120 119180 5/18/2008 28 f 266 1787 18 Group 1: Acute HIV-1 No ARV 133 119180 6/15/2008 56 f 224 1843 19 Group 1: Acute HIV-1 No ARV 112 119180 7/13/2008 84 f 163 1780 17 Group...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

Exploring Laboratory Data

Laboratory data can be organized and analyzed using LabKey Assay folders. This topic walks you through the basics using a simple Excel spreadsheet standing in for typically more complex instrument output. This topic is intended to be used alongside a trial. You should have another browser window open to view the Example Project > Laboratory Data folder. Tour Try It Now What Else Can I Do?...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

"labkey-query-stats.tsv" attached to message "Annotation of large protein databases"

#Summary - unique queries: 80, elapsed time: 8h47m55s #HTTP Requests - query count: 149, query time (ms): 491, request count: 30 #Background Threads - query count: 399, query time (ms): 12 972 Invocations Cumulative Average Max SQL 104 284 2 67 SELECT set FROM prop.propertysets WHERE UserId=? AND ObjectId=? AND Category=? 89 172 1 26 SELECT Name, Value FROM prop.properties WHERE set=? 57 6 028 105...

HIV Disease Progression - Demo Study-Lab Results-2019-04-11-0952.tsv

ParticipantId date QCStateLabel CD4 Lymphocytes Hemoglobin ViralLoad 101344 2008-04-30 00:00:00.0 811 1491 14.0 101344 2008-05-28 00:00:00.0 794 1446 13.0 101344 2008-06-25 00:00:00.0 653 1560 12.0 101344 2008-07-23 00:00:00.0 1176 1486 11.0 101344 2008-08-20 00:00:00.0 Not Yet Reviewed 1292 1343 11.0 10000 101344 2008-09-17 00:00:00.0 1210 1186 12.0 101344 2008-10-15 00:00:00.0 1158 1320...

"F004268.dat" attached to message "Mascot2XML"

MIME-Version: 1.0 (Generated by Mascot version 1.0) Content-Type: multipart/mixed; boundary=gc0p4Jq0M2Yt08jU534c0p --gc0p4Jq0M2Yt08jU534c0p Content-Type: application/x-Mascot; name="parameters" LICENSE=Licensed to: British Columbia Cancer Research Centre, Genome Sciences Ctr. (0262), (6 processors). MP= NM= COM=Submitted from Nobu's samples by Mascot Daemon on PROTEOMICS-1 (blank 005) IATOL= IA2TOL=...

05-36A31-IgA-Biotin.xls

ENV1 (31) File Name: 05-36A31-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 23-Jun-2011, 04:18 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 05-36A31 Signed By: Elizabeth Nelson Document ID: 9993 RP1 PMT (Volts): 743.83 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

03-31A82-IgA-Biotin.xls

ENV1 (31) File Name: 03-31A82-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:57 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 03-31A82 Signed By: Steve Hanson Document ID: 9992 RP1 PMT (Volts): 740.17 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

05-36A31-IgA-Biotin.xls

ENV1 (31) File Name: 05-36A31-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 23-Jun-2011, 04:18 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 05-36A31 Signed By: Elizabeth Nelson Document ID: 9993 RP1 PMT (Volts): 743.83 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

03-31A82-IgA-Biotin.xls

ENV1 (31) File Name: 03-31A82-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:57 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 03-31A82 Signed By: Steve Hanson Document ID: 9992 RP1 PMT (Volts): 740.17 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...