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Participant - 249320489

Annotated Study

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5008: Demographics ?
Start Date	2008-07-30
Country	USA
Primary Language
Gender	f
Treatment Group	No ARV
Cohort
Status of Infection	confirmed
Comments
Height	70

		Baseline	Month 1	Month 2	Month 5	Month 6	Month 7
		2008-07-30	2008-08-20	2008-09-26	2008-12-03	2009-01-15	2009-02-05
5004: Physical Exam ?	5	1		1	1	1	1
QC State		Not Yet Reviewed?		Not Yet Reviewed?	Not Yet Reviewed?	Not Yet Reviewed?	Not Yet Reviewed?
Date		2008-07-30		2008-09-26	2008-12-03	2009-01-15	2009-02-05
Height (cm)		179.9		179.1	179.0	179.7	178.7
Weight (kg)		90		86	84	75	72
Temperature (C)		36.9		40.0	37.2	36.5	37.5
Systolic Blood Pressure		124		134	128	140	130
Diastolic Blood Pressure		75		75	78	90	90
Pulse		70		70	56	78	70
Respirations		24		19	17	24	22
Clinician Signature/Date		0		1	1	1	1
Pregnancy		false		false	false	false	false
Form Language		English		English	English	English	English
ARV?		false		false	false	false	false
ARV Regimen Type

5017: Participation and Genetic Consent ?	1	1
QC State		Unspecified
Date		2008-07-30
Participation Consent		true
Genetic Consent		true
DSRowId		4
Di Import Hash
Day		0
Dataset Id		5017

5006: HIV Test Results ?	5	1		1	1	1	1
QC State		Unspecified		Unspecified	Unspecified	Unspecified	Unspecified
Date		2008-07-30		2008-09-26	2008-12-03	2009-01-15	2009-02-05
Day		0		58	126	169	190
HIV Western Blot		Positive		Positive		Positive	Positive
Standard HIV Antibody		Positive		Positive	Positive	Positive	Positive
Viral Load > = <		Equals		Equals	Equals	Equals	Equals
Viral Load Quantified (copies/ml)		8934		19995	59034	45689	65734
Viral Load Qualitative Result		Positive		Positive	Positive	Positive	Positive
HIV Rapid Blood Test		Positive		Positive		Positive	Positive
Source of HIV Tests		Olympia University Consortium		Olympia University Consortium	Olympia University Consortium	Olympia University Consortium	Olympia University Consortium

5007: Lab Results ?	5	1		1	1	1	1
QC State		Unspecified		Unspecified	Unspecified	Unspecified	Unspecified
Date		2008-07-30		2008-09-26	2008-12-03	2009-01-15	2009-02-05
Day		0		58	126	169	190
CD4+ (cells/mm3)		324		435	234	175	123
Lymphs (cells/mm3)		1600		1450	1300	1200	1200
Hemoglobin		11.9		13.3	16.4	13.3	12.9
Viral Load

5009: Status Assessment ?	5	1		1	1	1	1
QC State		Unspecified		Unspecified	Unspecified	Unspecified	Unspecified
Date		2008-07-30		2008-09-26	2008-12-03	2009-01-15	2009-02-05
Day		0		58	126	169	190
Meets Criteria for Acute		true		true	true	true	true
Agrees to Acute Schedule		true		true	true	true	true
Agrees to Provide Partner Info		true		true	true	true	true
Partner #1 ID		249328596		249328596	249328596	249328596	249328596
Partner #2 ID
Cohort		1		1	1	1	1

5018: Luminex Assay 100 ?	12	1	1	1	1	1
QC State		Unspecified	Unspecified	Unspecified	Unspecified	Unspecified
Date		2008-07-30	2008-08-20	2008-09-26	2008-12-03	2009-01-15
Data		40564	40564	40564	40564	40564
Name		02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls
Name		Luminex Assay 100	Luminex Assay 100	Luminex Assay 100	Luminex Assay 100	Luminex Assay 100
Well Role		Unknown	Unknown	Unknown	Unknown	Unknown
Type		X15	X19	X22	X26	X28
Well		D3	D7	D10	E2	E4
Outlier		0	0	0	0	0
Description		125	129	132	136	138
Specimen ID		125	129	132	136	138
Extra Specimen Info
FI String		30	22	17	1421.5	195.5
FI		30.0	22.0	17.0	1421.5	195.5
FI Number		30.0	22.0	17.0	1421.5	195.5
FI-Bkgd String		15	7	2	1406.5	180.5
FI-Bkgd		15.0	7.0	2.0	1406.5	180.5
FI-Bkgd Number		15.0	7.0	2.0	1406.5	180.5
Std Dev String
Std Dev		0.0	1.4142135	0.70710677	39.244427	1.4142135
Std Dev Number		0.0	1.4142135	0.70710677	39.244427	1.4142135
Obs Conc String		4.14991	2.26045	0.90228	180.97256	32.49039
Obs Conc BioPlex 5PL		4.14991	2.26045	0.90228	180.97256	32.49039
Obs Conc Number		4.14991	2.26045	0.90228	180.97256	32.49039
Exp Conc
(Obs/Exp)*100 BioPlex 5PL
Conc In Range
Conc In Range Number
Conc In Range String
Dilution		200.0	200.0	200.0	200.0	200.0
Group
Ratio
Sampling Errors
Bead Count		241	223	181	228	190
CV		0.0	0.061487544	0.042854957	0.028157435	0.0072710207
Summary		false	false	false	false	false
Titration
Name
Analyte
Name
Analyte		113	113	113	113	113
Name		ENV1 (31)	ENV1 (31)	ENV1 (31)	ENV1 (31)	ENV1 (31)
Visit ID
Isotype
Conjugate
Test Date
Replaces Previous File		false	false	false	false	false
Date file was modified
Specimen Type
Additive
Derivative
File Name		02-14A22-IgA-Biotin.srbx	02-14A22-IgA-Biotin.srbx	02-14A22-IgA-Biotin.srbx	02-14A22-IgA-Biotin.srbx	02-14A22-IgA-Biotin.srbx
Acquisition Date		2011-06-21	2011-06-21	2011-06-21	2011-06-21	2011-06-21
Reader Serial Number		LX10011084403	LX10011084403	LX10011084403	LX10011084403	LX10011084403
Plate ID		02-14A22	02-14A22	02-14A22	02-14A22	02-14A22
RP1 PMT (Volts)		687.42	687.42	687.42	687.42	687.42
RP1 Target		16357	16357	16357	16357	16357
Participant Visit Resolver		Lookup	Lookup	Lookup	Lookup	Lookup
Species		Human	Human	Human	Human	Human
Lab ID		LabKey	LabKey	LabKey	LabKey	LabKey
Analysis Software		Bioplex	Bioplex	Bioplex	Bioplex	Bioplex
Assay Id		02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls
Comments
DSRowId		58	60	62	64	66
Di Import Hash
Row Id		9034	9042	9048	9055	9059
Protocol		1221	1221	1221	1221	1221
FI OOR Indicator
FI-Bkgd OOR Indicator
Std Dev OOR Indicator
Obs Conc BioPlex 5PL OOR Indicator
Conc In Range OOR Indicator
Analyte Titration		113	113	113	113	113
Single Point Control
Analyte Single Point Control		113	113	113	113	113
Day		0	21	58	126	169
Dataset Id		5018	5018	5018	5018	5018

5010: GenericAssay ?	5		1	1	1	1
QC State			Unspecified	Unspecified	Unspecified	Unspecified
Date			2008-08-20	2008-09-26	2008-12-03	2009-01-15
M1			324	435	234	175
M2			1600	1450	1300	1200
M3			11.9	13.3	16.4	13.3
File
Instrument Setting			24	24	24	24
Operator Email			john.doe	john.doe	john.doe	john@labkey.com
Instrument			ABI-QSTAR	ABI-QSTAR	ABI-QSTAR	ABI-QSTAR
Instrument ID
Assay Id			Run1	Run2	Run2	Run3
Comments
DSRowId			16	17	18	20
Di Import Hash
RowId			4	16	17	29
Day			21	58	126	169
Dataset Id			5010	5010	5010	5010

5012: ELISpotAssay ?	24				1
QC State					Unspecified
Date					2008-12-03
Day					126
Antigen ID					8
Antigen Name					KLH
Cell Well					40000
Spot Count					0.0
Wellgroup Location					(7, 11)
Wellgroup Name					Specimen 4

5013: NAbAssay ?	1				1
QC State					Unspecified
Date					2008-12-03
LSID					urn:lsid:cpas.fhcrc.org:Sample.656.NAbAssay:OBJECT-Specimen+4-1252015588751
Fit Error					4.45788
Wellgroup Name					Specimen 4
AUC Poly					0.54052806
Positive AUC Poly					0.54052806
AUC 4pl					0.56757456
Positive AUC 4pl					0.56757456
AUC 5pl					0.5466808
Positive AUC 5pl					0.5466808
Specimen ID					249328595.2604.530
Visit ID					2804.0
Sample Description
Initial Dilution					20.0
Dilution Factor					3.0
Method					Dilution
Point IC50					1644.2207
Point IC80					194.68642
Cutoff Percentage (1)					50
Cutoff Percentage (2)					80
Cutoff Percentage (3)
Virus Name					HIV-1
Virus ID					P392
Host Cell					T
Study Name					Demo
Experiment Performer					Elizabeth
Experiment ID					Nab32
Incubation Time					30
Plate Number					1
Experiment Date
File ID					NAbresults2
Lock Graph Y-Axis					false
Curve Fit Method					Five Parameter
Assay Id					NAb1
Comments
DSRowId					4
Di Import Hash
ObjectId					39
Object Uri					urn:lsid:cpas.fhcrc.org:AssayRunNabDataRow.Folder-656:7a8520ae-7af4-102c-ba3f-d104f9cd649f-Specimen+4
Specimen					urn:lsid:cpas.fhcrc.org:Sample.656.NAbAssay:OBJECT-Specimen+4-1252015588751
Day					126
Dataset Id					5013

5015: MicroarrayAssay ?	2				1
QC State					Unspecified
Date					2008-12-03
Producer					Agilent Feature Extraction Software
Version					8.1.1.1
Protocol_Name					22k_.15 (Read Only)
RunPropertyWithoutXPath					2
Assay Id					test2_MAGEML.xml
Comments
DSRowId					2
Di Import Hash
RowId					2
Day					126
Dataset Id					5015

LabKey Support

LabKey Support

Participant - 249320489