Studies

  • Participant reports. Improved user interface and data formatting.
  • Dataset status. Track your study's progress by setting the status of each dataset as draft, locked, unlocked, etc. Summary table shows status of each dataset in a study.
  • Faceted filtering. Filter dialog now includes data facets. Faceted filtering can be turned on or off for individual columns.
  • Timepoint auto-creation. Improved behavior when automatically creating timepoint upon data import. Now set a default timepoint duration. (For date-based studies only.)
  • Folder Export/Import. Improved folder archiving includes: (1) exporting folder settings such as folder type, enabled modules, etc., (2) exporting external schema definitions, (3) allowing study archives inside of folder archives, (4) support for folder templates.
  • Custom thumbnail previews. Add custom preview thumbnails to the data browser.
  • Participant group categories. Organize your participant groups into categories, such as Gender, Infection Status, etc.
  • New "link" report type. Add a report that links to an external document or web page.
  • List fields. Records in a list now include these automatically updated fields: Created, CreatedBy, Modified, ModifiedBy.

Assays

  • Transform scripts. Associate multiple transform/QC scripts with an assay design. Scripts will run in series upon data upload.
  • Background/unstimulated wells. (ELISpot). Subtract background noise from data using unstimulated wells as a control.
  • Improved spectra count support (Proteomics). Additional options for performing the spectra count comparison, and exporting it for use in other tools.
  • NAb migration tool (NAb). Migrate your NAb data from LabKey's legacy implementation to LabKey's current NAb implementation.
  • Luminex curve fits (Luminex). Improved curve fit behavior makes assay quality control more efficient.
  • Illumina support (Genotyping). Upload, manage, and analyze your Illumina results.
  • Copy flow data to a study. (Flow Cytometry). Copy-to-study now applies to flow data.

Visualization

  • Quick charts. Create a chart from a column in two clicks. Create a "best guess" chart of your data. Charts are automatically redrawn when the underlying data is filtered. Toggle between box plot/scatter plot renderings.
  • Box plots. Chart the quartile distributions. Outliers are shown as data points. Cohorts and participant groups are included as options for the X axis.
  • Scatter plots. Chart correlations in your data. Edit the radius, color, and opacity of data points.
  • Time charts. New look and feel for the chart editing environment: (1) popup dialog boxes, (2) edit axis properties directly from chart, (3) updated filter panel, (4) "View Mode" hides the editing buttons. Refactored to use the new charting API -- see the API section below for details.
  • Links from data points. Developers can add a function to be called when a data point is clicked.
  • New Charting API / JavaScript Libraries. See the API section below for details.

Pipeline

  • Remote pipeline server installer. Easily configure a remote pipeline server with a wizard-style installer.

Security

  • Impersonate roles. Impersonate security roles in addition to impersonating security groups and individual users.
  • Auditing. Dataset export events (including filter information) can be viewed in the audit log.

Specimens

  • sampleminded support. Import specimen data in the sampleminded format.
  • Specimen search/requests. Users can now select multiple items simultaneously from dropdown menus.
  • Specimen request notification. Set default notification behavior when specimens are requested from the repository.
  • Specimen import. Build a specimen request by uploading a file containing specimen ids.

Search

  • Full-text search for lists. Customizable indexing of list data and metadata.

New APIs

  • Charting API. New graphics API combines the D3 and Raphael javascript libraries.
  • Ext 4.1.0. LabKey Server now uses Ext 4.1.0.
  • Declaring dependencies. New mechanism for declaring script dependencies.
  • LabKey SQL improvements. GROUP_CONCAT aggregate function support on Microsoft SQL Server and ability to specify custom delimiters.
  • Tighter security on some core queries. Previously, all authenticated users (non-guests) were able to see data in the core.members and core.principal queries. These are now restricted to users with Admin permissions.

Related Links

discussion

Discussion

Search 

Pages 

previousnext
 
expand all collapse all