Conversion of LabKey results (X!Tandem/Prophet) to PRIDE XML

CPAS Forum (Inactive)
Conversion of LabKey results (X!Tandem/Prophet) to PRIDE XML robert.winkler  2012-03-22 16:15
Status: Closed
 
Hi, I would like to upload LabKey 11.3 results (X!Tandem/Prophet) to the PRIDE repository.

When starting the conversion with the PRIDE converter v. 2.5.5., the following error occurs:

Found a spectrum query at line 704 which references run '100517_BSA_COOM.mzXML' while it is contained in run element '100517_BSA_COOM'!

Ideas?

Thanks, Robert