__ || | _ |_ |/ _ (¯ _ _ _ _ (__) |_(_||_)|\(/_\/ _)(/_| \/(/_| / INFO DbScope 2023-04-06T15:32:50,268 main : Initializing DbScope with the following configuration: DataSource Name: labkeyDataSource Server URL: jdbc:postgresql://172.19.20.197:5432/labkey_development?sslmode=require Database Name: labkey_development Database Product Name: PostgreSQL Database Product Version: 14.7 (Ubuntu 14.7-0ubuntu0.22.04.1) JDBC Driver Name: PostgreSQL JDBC Driver JDBC Driver Version: 42.5.0 SQL Dialect: PostgreSql_14_Dialect Connection Pool Size: 20 INFO ModuleLoader 2023-04-06T15:32:51,416 main : Server installation GUID: b4622e20-3752-102f-9f16-30849ad026d4, server session GUID: bbcf3590-b6df-103b-a4c7-db6209da174d INFO CloudWatchManager 2023-04-06T15:32:51,455 main : Initiating CloudWatchManager INFO DbScope 2023-04-06T15:32:54,752 main : no schema metadata xml file found for schema "junit" INFO DbScope 2023-04-06T15:32:54,898 main : no schema metadata xml file found for schema "qctrendreport" INFO DbScope 2023-04-06T15:32:54,902 main : no schema metadata xml file found for schema "sampleManagement" ERROR ModuleLoader 2023-04-06T15:32:54,965 main : This server is running with 24 downgraded modules. The server will not operate properly and could corrupt your data. You should immediately stop the server and contact LabKey for assistance. Modules affected: [Core, Announcements, Docker, Mothership, Pipeline, Query, Experiment, Assay, Audit, DataIntegration, Elisa, FileContent, Flow, Inventory, List, ELISpotAssay, Microarray, MS2, Nab, Premium, SampleManagement, Search, Issues, Ontology] INFO ModuleLoader 2023-04-06T15:32:54,966 main : Modules requiring upgrade: [Signing, Compliance, Study, LabBook] INFO ModuleLoader 2023-04-06T15:32:54,973 main : LabKey Server startup is complete; modules are being upgraded and initialized in the background INFO ViewServlet 2023-04-06T15:32:54,975 main : ViewServlet initialized INFO ViewServlet 2023-04-06T15:32:54,975 main : WEBAPP: /usr/local/labkey/labkey/labkeywebapp/ INFO ViewServlet 2023-04-06T15:32:54,975 main : PATH: /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin INFO SqlScriptRunner 2023-04-06T15:32:55,054 Module Upgrade : Running [study-drop.sql] INFO SqlScriptManager 2023-04-06T15:32:55,071 Module Upgrade : start running script : study-drop.sql INFO SqlScriptManager 2023-04-06T15:32:55,093 Module Upgrade : finished running script : study-drop.sql INFO DbScope 2023-04-06T15:32:55,167 Module Upgrade : no schema metadata xml file found for schema "sampleManagement" INFO DbScope 2023-04-06T15:32:55,186 Module Upgrade : no schema metadata xml file found for schema "qctrendreport" INFO SqlScriptRunner 2023-04-06T15:32:55,241 Module Upgrade : Running [ms2-drop.sql] INFO SqlScriptManager 2023-04-06T15:32:55,242 Module Upgrade : start running script : ms2-drop.sql INFO SqlScriptManager 2023-04-06T15:32:55,255 Module Upgrade : finished running script : ms2-drop.sql INFO SqlScriptRunner 2023-04-06T15:32:55,385 Module Upgrade : Running [exp-drop.sql] INFO SqlScriptManager 2023-04-06T15:32:55,387 Module Upgrade : start running script : exp-drop.sql INFO SqlScriptManager 2023-04-06T15:32:55,408 Module Upgrade : finished running script : exp-drop.sql INFO DbScope 2023-04-06T15:32:55,433 Module Upgrade : no schema metadata xml file found for schema "junit" INFO SqlScriptRunner 2023-04-06T15:32:55,484 Module Upgrade : Running [comm-drop.sql] INFO SqlScriptManager 2023-04-06T15:32:55,488 Module Upgrade : start running script : comm-drop.sql INFO SqlScriptManager 2023-04-06T15:32:55,494 Module Upgrade : finished running script : comm-drop.sql WARN FileSqlScriptProvider 2023-04-06T15:32:55,570 Module Upgrade : comm-22.003-22.004.sql will never execute because Announcements schema version is less than this script's "to" version INFO SqlScriptRunner 2023-04-06T15:32:55,572 Module Upgrade : Running [comm-create.sql] INFO SqlScriptManager 2023-04-06T15:32:55,573 Module Upgrade : start running script : comm-create.sql INFO SqlScriptManager 2023-04-06T15:32:55,595 Module Upgrade : finished running script : comm-create.sql ERROR ModuleUpgrader 2023-04-06T15:32:55,665 Module Upgrade : Failure during module upgrade java.lang.ClassCastException: class java.lang.String cannot be cast to class [Ljava.lang.Object; (java.lang.String and [Ljava.lang.Object; are in module java.base of loader 'bootstrap') at org.labkey.api.data.Table.update(Table.java:879) ~[api-22.11.0.jar:?] at org.labkey.api.data.Table.update(Table.java:840) ~[api-22.11.0.jar:?] at org.labkey.api.data.Table.update(Table.java:835) ~[api-22.11.0.jar:?] at org.labkey.api.module.ModuleLoader.saveModuleContext(ModuleLoader.java:1584) ~[api-22.11.0.jar:?] at org.labkey.api.module.ModuleContext.upgradeComplete(ModuleContext.java:141) ~[api-22.11.0.jar:?] at org.labkey.api.module.ModuleUpgrader.upgrade(ModuleUpgrader.java:100) ~[api-22.11.0.jar:?] at org.labkey.api.module.ModuleUpgrader.lambda$upgrade$0(ModuleUpgrader.java:110) ~[api-22.11.0.jar:?] at java.lang.Thread.run(Thread.java:833) ~[?:?] ERROR ExceptionUtil 2023-04-06T15:32:58,126 http-nio-8080-exec-2 : Unhandled exception: class java.lang.String cannot be cast to class [Ljava.lang.Object; (java.lang.String and [Ljava.lang.Object; are in module java.base of loader 'bootstrap') java.lang.ClassCastException: class java.lang.String cannot be cast to class [Ljava.lang.Object; (java.lang.String and [Ljava.lang.Object; are in module java.base of loader 'bootstrap') at org.labkey.api.data.Table.update(Table.java:879) ~[api-22.11.0.jar:?] at org.labkey.api.data.Table.update(Table.java:840) ~[api-22.11.0.jar:?] at org.labkey.api.data.Table.update(Table.java:835) ~[api-22.11.0.jar:?] at org.labkey.api.module.ModuleLoader.saveModuleContext(ModuleLoader.java:1584) ~[api-22.11.0.jar:?] at org.labkey.api.module.ModuleContext.upgradeComplete(ModuleContext.java:141) ~[api-22.11.0.jar:?] at org.labkey.api.module.ModuleUpgrader.upgrade(ModuleUpgrader.java:100) ~[api-22.11.0.jar:?] at org.labkey.api.module.ModuleUpgrader.lambda$upgrade$0(ModuleUpgrader.java:110) ~[api-22.11.0.jar:?] at java.lang.Thread.run(Thread.java:833) ~[?:?]