sleeping for 0 seconds... Adding secrets to config/application.properties from environment variables... Purging secrets and other bits from environment variables... saw JSON_OUTPUT=false and LOG4J_CONFIG_FILE=log4j2.xml mkdir: created directory '/labkey/files/heap_dumps_20240528_125539' 2024-05-28 13:55:41.928 E INFO 1 --- [ main] org.labkey.embedded.LabKeyServer : Starting LabKeyServer using Java 17.0.10 on 409e696f7496 with PID 1 (/labkey/app.jar started by root in /labkey) 2024-05-28 13:55:41.945 E DEBUG 1 --- [ main] org.labkey.embedded.LabKeyServer : Running with Spring Boot v2.7.18, Spring v5.3.32 2024-05-28 13:55:41.946 E INFO 1 --- [ main] org.labkey.embedded.LabKeyServer : No active profile set, falling back to 1 default profile: "default" 2024-05-28 13:55:44.377 E DEBUG 1 --- [ main] org.labkey.embedded.LabKeyServer$1 : Code archive: /labkey/app.jar 2024-05-28 13:55:44.377 E DEBUG 1 --- [ main] org.labkey.embedded.LabKeyServer$1 : Code archive: /labkey/app.jar 2024-05-28 13:55:44.378 E DEBUG 1 --- [ main] org.labkey.embedded.LabKeyServer$1 : None of the document roots [src/main/webapp, public, static] point to a directory and will be ignored. ERROR StatusConsoleListener DefaultRolloverStrategy contains an invalid element or attribute "LabKeyDelete" INFO ModuleLoader 2024-05-28T13:56:03,022 main : __ || | _ |_ |/ _ (¯ _ _ _ _ (__) |_(_||_)|\(/_\/ _)(/_| \/(/_| / INFO DbScope 2024-05-28T13:56:05,180 main : Application name detected on first database connection: "PostgreSQL JDBC Driver" (the default name); all subsequent connections will use "LabKey Server" instead. INFO DbScope 2024-05-28T13:56:05,291 main : Initializing DbScope with the following configuration: DataSource Name: labkeyDataSource Server URL: jdbc:postgresql://xxxxxxxxxxxxxxxxxxxxxxxxxx:5432/labkeyprod Database Name: labkeyprod Database Product Name: PostgreSQL Database Product Version: 12.17 JDBC Driver Name: PostgreSQL JDBC Driver JDBC Driver Version: 42.7.2 SQL Dialect: PostgreSql_12_Dialect Connection Pool Size: 50 INFO SqlScriptRunner 2024-05-28T13:56:06,476 main : Running [test-drop.sql] INFO SqlScriptManager 2024-05-28T13:56:06,488 main : start running script : test-drop.sql INFO SqlScriptManager 2024-05-28T13:56:06,718 main : finished running script : test-drop.sql INFO SqlScriptRunner 2024-05-28T13:56:06,734 main : Running [prop-drop.sql] INFO SqlScriptManager 2024-05-28T13:56:06,735 main : start running script : prop-drop.sql INFO SqlScriptManager 2024-05-28T13:56:06,740 main : finished running script : prop-drop.sql INFO SqlScriptRunner 2024-05-28T13:56:06,745 main : Running [core-drop.sql] INFO SqlScriptManager 2024-05-28T13:56:06,745 main : start running script : core-drop.sql INFO SqlScriptManager 2024-05-28T13:56:06,753 main : finished running script : core-drop.sql INFO SqlScriptRunner 2024-05-28T13:56:06,924 main : Running [core-23.005-23.006.sql] INFO SqlScriptManager 2024-05-28T13:56:06,926 main : start running script : core-23.005-23.006.sql INFO SqlScriptManager 2024-05-28T13:56:06,930 main : finished running script : core-23.005-23.006.sql INFO SqlScriptRunner 2024-05-28T13:56:06,973 main : Running [core-create.sql] INFO SqlScriptManager 2024-05-28T13:56:06,974 main : start running script : core-create.sql INFO SqlScriptManager 2024-05-28T13:56:07,275 main : finished running script : core-create.sql INFO SqlScriptRunner 2024-05-28T13:56:07,341 main : Running [prop-23.007-23.008.sql, prop-23.008-23.009.sql] INFO SqlScriptManager 2024-05-28T13:56:07,343 main : start running script : prop-23.007-23.008.sql INFO SqlScriptManager 2024-05-28T13:56:07,365 main : finished running script : prop-23.007-23.008.sql INFO SqlScriptManager 2024-05-28T13:56:07,379 main : start running script : prop-23.008-23.009.sql INFO SqlScriptExecutor 2024-05-28T13:56:07,386 main : Executing CoreUpgradeCode.saveNullStrengthAsWeak(ModuleContext moduleContext) INFO CoreUpgradeCode 2024-05-28T13:56:07,388 main : Upgrading an existing installation and checking current password strength INFO CoreUpgradeCode 2024-05-28T13:56:07,613 main : Password strength has not been saved; setting to Weak, the previous default value. INFO SqlScriptManager 2024-05-28T13:56:07,922 main : finished running script : prop-23.008-23.009.sql INFO SqlScriptRunner 2024-05-28T13:56:08,011 main : Running [prop-create.sql] INFO SqlScriptManager 2024-05-28T13:56:08,012 main : start running script : prop-create.sql INFO SqlScriptManager 2024-05-28T13:56:08,092 main : finished running script : prop-create.sql INFO SqlScriptRunner 2024-05-28T13:56:08,167 main : Running [test-create.sql] INFO SqlScriptManager 2024-05-28T13:56:08,169 main : start running script : test-create.sql INFO SqlScriptManager 2024-05-28T13:56:08,193 main : finished running script : test-create.sql INFO ModuleLoader 2024-05-28T13:56:08,601 main : Starting LabKey Server 23.11.11 INFO ModuleLoader 2024-05-28T13:56:08,621 main : Server installation GUID: ec9d8dc0-f431-1038-a256-0d7d80c87f30, server session GUID: 902d0d20-ff1f-103c-a433-dcb7e9d3a3da INFO ModuleLoader 2024-05-28T13:56:08,621 main : Deploying to context path INFO DbScope 2024-05-28T13:56:10,659 main : no schema metadata xml file found for schema "junit" INFO ModuleLoader 2024-05-28T13:56:10,719 main : Modules requiring upgrade: [affinityMaturationModule, Announcements, antibodyModule, autoimmune, blindDateModule, chromatogramViewer, Crystallography, massSpecModule, massSpecReferenceDatabase, plateWellViewer, prevalenceDashboard, Experiment, Assay, Audit, sampleFileViewModule, Search] INFO ModuleLoader 2024-05-28T13:56:10,721 main : LabKey Server startup is complete; modules are being upgraded and initialized in the background INFO ViewServlet 2024-05-28T13:56:10,724 main : ViewServlet initialized INFO ViewServlet 2024-05-28T13:56:10,725 main : WEBAPP: /labkey/server/labkeywebapp/ INFO ViewServlet 2024-05-28T13:56:10,725 main : PATH: /opt/java/openjdk/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin INFO SqlScriptRunner 2024-05-28T13:56:10,743 Module Upgrade : Running [study-drop.sql] INFO SqlScriptManager 2024-05-28T13:56:10,743 Module Upgrade : start running script : study-drop.sql INFO SqlScriptManager 2024-05-28T13:56:10,754 Module Upgrade : finished running script : study-drop.sql INFO SqlScriptRunner 2024-05-28T13:56:10,975 Module Upgrade : Running [exp-drop.sql] INFO SqlScriptManager 2024-05-28T13:56:10,986 Module Upgrade : start running script : exp-drop.sql INFO SqlScriptManager 2024-05-28T13:56:11,051 Module Upgrade : finished running script : exp-drop.sql INFO DbScope 2024-05-28T13:56:11,179 Module Upgrade : no schema metadata xml file found for schema "junit" INFO SqlScriptRunner 2024-05-28T13:56:11,217 Module Upgrade : Running [comm-drop.sql] INFO SqlScriptManager 2024-05-28T13:56:11,218 Module Upgrade : start running script : comm-drop.sql INFO SqlScriptManager 2024-05-28T13:56:11,247 Module Upgrade : finished running script : comm-drop.sql INFO SqlScriptRunner 2024-05-28T13:56:11,420 Module Upgrade : Running [comm-23.000-23.001.sql] INFO SqlScriptManager 2024-05-28T13:56:11,421 Module Upgrade : start running script : comm-23.000-23.001.sql INFO SqlScriptManager 2024-05-28T13:56:11,476 Module Upgrade : finished running script : comm-23.000-23.001.sql INFO SqlScriptRunner 2024-05-28T13:56:11,574 Module Upgrade : Running [comm-create.sql] INFO SqlScriptManager 2024-05-28T13:56:11,576 Module Upgrade : start running script : comm-create.sql INFO SqlScriptManager 2024-05-28T13:56:11,600 Module Upgrade : finished running script : comm-create.sql INFO DbScope 2024-05-28T13:56:11,835 Module Upgrade : no schema metadata xml file found for schema "junit" INFO SqlScriptRunner 2024-05-28T13:56:11,874 Module Upgrade : Running [exp-23.003-23.004.sql, exp-23.004-23.005.sql, exp-23.005-23.006.sql, exp-23.006-23.007.sql, exp-23.007-23.008.sql, exp-23.008-23.009.sql, exp-23.009-23.010.sql, exp-23.010-23.011.sql] INFO SqlScriptManager 2024-05-28T13:56:11,875 Module Upgrade : start running script : exp-23.003-23.004.sql INFO SqlScriptManager 2024-05-28T13:56:11,879 Module Upgrade : finished running script : exp-23.003-23.004.sql INFO SqlScriptManager 2024-05-28T13:56:11,886 Module Upgrade : start running script : exp-23.004-23.005.sql INFO SqlScriptManager 2024-05-28T13:56:11,961 Module Upgrade : finished running script : exp-23.004-23.005.sql INFO SqlScriptManager 2024-05-28T13:56:11,968 Module Upgrade : start running script : exp-23.005-23.006.sql INFO SqlScriptManager 2024-05-28T13:56:11,974 Module Upgrade : finished running script : exp-23.005-23.006.sql INFO SqlScriptManager 2024-05-28T13:56:11,986 Module Upgrade : start running script : exp-23.006-23.007.sql INFO SqlScriptManager 2024-05-28T13:56:12,106 Module Upgrade : finished running script : exp-23.006-23.007.sql INFO SqlScriptManager 2024-05-28T13:56:12,117 Module Upgrade : start running script : exp-23.007-23.008.sql INFO SqlScriptExecutor 2024-05-28T13:56:12,123 Module Upgrade : Executing ExperimentUpgradeCode.recomputeAliquotAvailableAmount(ModuleContext moduleContext) 2024-05-28 13:56:12.237 E INFO 1 --- [ main] org.labkey.embedded.LabKeyServer : Started LabKeyServer in 31.337 seconds (JVM running for 32.127) 127.0.0.1 - - [28/May/2024:13:56:13 +0100] "GET /_/health HTTP/2.0" 200 15 INFO SqlScriptManager 2024-05-28T13:56:13,933 Module Upgrade : finished running script : exp-23.007-23.008.sql INFO SqlScriptManager 2024-05-28T13:56:13,972 Module Upgrade : start running script : exp-23.008-23.009.sql INFO SqlScriptManager 2024-05-28T13:56:14,053 Module Upgrade : finished running script : exp-23.008-23.009.sql INFO SqlScriptManager 2024-05-28T13:56:14,063 Module Upgrade : start running script : exp-23.009-23.010.sql 127.0.0.1 - - [28/May/2024:13:56:19 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:56:24 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:56:29 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:56:34 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:56:39 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:56:44 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:56:49 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:56:54 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:56:59 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:05 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:10 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:15 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:20 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:25 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:30 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:35 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:40 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:46 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:51 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:57:56 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:01 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:06 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:11 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:16 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:21 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:26 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:32 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:37 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:42 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:47 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:52 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:58:57 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:02 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:07 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:12 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:18 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:23 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:28 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:33 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:38 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:43 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:48 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:53 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:13:59:58 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:04 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:09 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:14 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:19 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:24 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:29 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:34 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:39 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:44 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:50 +0100] "GET /_/health HTTP/2.0" 200 15 127.0.0.1 - - [28/May/2024:14:00:55 +0100] "GET /_/health HTTP/2.0" 200 15 ERROR StatusConsoleListener DefaultRolloverStrategy contains an invalid element or attribute "LabKeyDelete" 172.17.0.1 - - [28/May/2024:14:00:57 +0100] "GET /home/project-start.view HTTP/1.1" 302 - 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /admin-maintenance.view?returnUrl=%2Fhome%2Fproject-start.view HTTP/1.1" 401 12299 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /labkey.js?1920017736 HTTP/1.1" 200 6803 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /core/css/core.css?1920017736 HTTP/1.1" 200 7213 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /clientapi.min.js?1920017736 HTTP/1.1" 200 34133 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /core/css/core.js?1920017736 HTTP/1.1" 200 13159 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /core/css/seattle.css?1920017736 HTTP/1.1" 200 29593 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /internal/jQuery/jquery-dateFormat.min.js?1920017736 HTTP/1.1" 200 1839 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /internal/jQuery/jquery-3.5.1.min.js?1920017736 HTTP/1.1" 200 30950 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /clientapi/labkey-api-js-core.min.js?1920017736 HTTP/1.1" 200 33261 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /internal.min.js?1920017736 HTTP/1.1" 200 3571 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /core/ProductNavigationHeader.js?1920017736 HTTP/1.1" 200 674 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /logo.image?revision=29 HTTP/1.1" 200 3845 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /logo-mobile.image?revision=29 HTTP/1.1" 200 1408 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /favicon.image?revision=29 HTTP/1.1" 200 15086 172.17.0.1 - - [28/May/2024:14:00:58 +0100] "GET /_websocket/notifications HTTP/1.1" 404 431 172.17.0.1 - - [28/May/2024:14:00:59 +0100] "GET /admin-startupStatus.view HTTP/1.1" 200 54 172.17.0.1 - - [28/May/2024:14:00:59 +0100] "GET /admin-startupStatus.view HTTP/1.1" 200 54 127.0.0.1 - - [28/May/2024:14:01:00 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:01:00 +0100] "GET /admin-startupStatus.view HTTP/1.1" 200 54 172.17.0.1 - - [28/May/2024:14:01:01 +0100] "GET /admin-startupStatus.view HTTP/1.1" 200 54 172.17.0.1 - - [28/May/2024:14:01:01 +0100] "GET /admin-startupStatus.view HTTP/1.1" 200 54 172.17.0.1 - - [28/May/2024:14:01:02 +0100] "GET /admin-startupStatus.view HTTP/1.1" 200 54 172.17.0.1 - - [28/May/2024:14:01:02 +0100] "GET /login-login.view?returnUrl=%2Fhome%2Fproject-start.view HTTP/1.1" 200 11753 172.17.0.1 - - [28/May/2024:14:01:02 +0100] "GET /login.js?1920017736 HTTP/1.1" 200 2558 172.17.0.1 - - [28/May/2024:14:01:02 +0100] "GET /_websocket/notifications HTTP/1.1" 404 431 172.17.0.1 - - [28/May/2024:14:01:04 +0100] "GET /favicon.image?revision=29 HTTP/1.1" 200 15086 172.17.0.1 - - [28/May/2024:14:01:04 +0100] "POST /login-loginApi.api HTTP/1.1" 200 727 172.17.0.1 - - [28/May/2024:14:01:05 +0100] "GET /home/project-start.view HTTP/1.1" 302 - 172.17.0.1 - - [28/May/2024:14:01:05 +0100] "GET /admin-moduleStatus.view?returnUrl=%2Fhome%2Fproject-start.view HTTP/1.1" 200 24420 172.17.0.1 - - [28/May/2024:14:01:05 +0100] "GET /core/css/ext4_seattle.css?1920017736 HTTP/1.1" 200 28803 172.17.0.1 - - [28/May/2024:14:01:05 +0100] "GET /ext-4.2.1/ext-patches.js?1920017736 HTTP/1.1" 200 12456 172.17.0.1 - - [28/May/2024:14:01:05 +0100] "GET /ext-4.2.1/ext-all-sandbox.js?1920017736 HTTP/1.1" 200 448099 127.0.0.1 - - [28/May/2024:14:01:05 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:01:05 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:05 +0100] "GET /_websocket/notifications HTTP/1.1" 404 431 172.17.0.1 - - [28/May/2024:14:01:05 +0100] "POST /core-webSocketConnection.api HTTP/1.1" 302 - 172.17.0.1 - - [28/May/2024:14:01:05 +0100] "GET /admin-moduleStatus.view?returnUrl=%2Fcore-webSocketConnection.api HTTP/1.1" 200 24450 172.17.0.1 - - [28/May/2024:14:01:06 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:06 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:07 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:07 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:08 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:08 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:09 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:10 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:01:10 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:01:10 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:11 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:11 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:12 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:12 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:13 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:13 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:14 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:15 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:15 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:01:15 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:01:16 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:16 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:17 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:17 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:18 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:18 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:19 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:19 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:20 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:01:20 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:01:21 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:21 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:22 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - 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[28/May/2024:14:01:37 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:38 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:38 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:39 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:39 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:40 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:40 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:01:41 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:01:41 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:01:41 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - 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172.17.0.1 - - [28/May/2024:14:02:21 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:02:22 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:02:22 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:23 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:24 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:25 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:26 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:02:27 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:02:27 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:28 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:29 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/_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:02:38 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:39 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:40 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:41 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:42 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:02:42 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:02:43 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:44 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:45 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:46 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:47 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:02:47 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:02:48 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:49 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:50 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:51 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:52 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:02:52 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:02:53 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:54 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:55 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:56 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:57 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:02:57 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:02:58 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:02:59 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:00 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:01 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:02 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:02 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:03 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:04 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:05 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:06 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:07 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:08 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:08 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:09 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:10 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:11 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:12 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:13 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:13 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:14 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:15 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:16 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:17 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:18 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:18 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:19 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:20 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:21 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:22 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:23 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:23 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:24 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:25 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:26 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:27 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:28 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:28 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:29 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:30 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:31 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:32 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:33 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:33 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:34 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:35 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:36 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:37 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:38 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:38 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:39 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:40 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:41 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:42 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:43 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:43 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:44 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:45 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:46 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:47 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:48 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 127.0.0.1 - - [28/May/2024:14:03:48 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:49 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 172.17.0.1 - - [28/May/2024:14:03:50 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3657 INFO SqlScriptManager 2024-05-28T14:03:50,287 Module Upgrade : finished running script : exp-23.009-23.010.sql INFO SqlScriptManager 2024-05-28T14:03:50,308 Module Upgrade : start running script : exp-23.010-23.011.sql INFO SqlScriptManager 2024-05-28T14:03:50,350 Module Upgrade : finished running script : exp-23.010-23.011.sql INFO SqlScriptRunner 2024-05-28T14:03:50,471 Module Upgrade : Running [exp-create.sql] INFO SqlScriptManager 2024-05-28T14:03:50,478 Module Upgrade : start running script : exp-create.sql INFO SqlScriptManager 2024-05-28T14:03:50,710 Module Upgrade : finished running script : exp-create.sql INFO SqlScriptRunner 2024-05-28T14:03:50,900 Module Upgrade : Running [assay-23.000-23.001.sql, assay-23.001-23.002.sql, assay-23.002-23.003.sql] INFO SqlScriptManager 2024-05-28T14:03:50,901 Module Upgrade : start running script : assay-23.000-23.001.sql INFO SqlScriptExecutor 2024-05-28T14:03:50,906 Module Upgrade : Adding deferred upgrade to execute AssayUpgradeCode.addAssayDataCreatedColumns(ModuleContext moduleContext) INFO SqlScriptManager 2024-05-28T14:03:50,906 Module Upgrade : finished running script : assay-23.000-23.001.sql INFO SqlScriptManager 2024-05-28T14:03:50,921 Module Upgrade : start running script : assay-23.001-23.002.sql INFO SqlScriptManager 2024-05-28T14:03:51,068 Module Upgrade : finished running script : assay-23.001-23.002.sql INFO SqlScriptManager 2024-05-28T14:03:51,074 Module Upgrade : start running script : assay-23.002-23.003.sql INFO SqlScriptExecutor 2024-05-28T14:03:51,076 Module Upgrade : Adding deferred upgrade to execute AssayUpgradeCode.updateProtocolPlateTemplate(ModuleContext moduleContext) INFO SqlScriptManager 2024-05-28T14:03:51,077 Module Upgrade : finished running script : assay-23.002-23.003.sql INFO SqlScriptRunner 2024-05-28T14:03:51,260 Module Upgrade : Running [audit-23.000-23.001.sql] INFO SqlScriptManager 2024-05-28T14:03:51,262 Module Upgrade : start running script : audit-23.000-23.001.sql INFO SqlScriptExecutor 2024-05-28T14:03:51,291 Module Upgrade : Executing AuditUpgradeCode.updateSerialToBigInt(ModuleContext moduleContext) INFO SqlScriptManager 2024-05-28T14:03:51,582 Module Upgrade : finished running script : audit-23.000-23.001.sql 172.17.0.1 - - [28/May/2024:14:03:51 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3423 INFO SqlScriptRunner 2024-05-28T14:03:51,850 Module Upgrade : Running [study-create.sql] INFO SqlScriptManager 2024-05-28T14:03:51,853 Module Upgrade : start running script : study-create.sql INFO SqlScriptManager 2024-05-28T14:03:51,872 Module Upgrade : finished running script : study-create.sql INFO ModuleLoader 2024-05-28T14:03:52,092 Module Upgrade : Starting up modules INFO ModuleLoader 2024-05-28T14:03:52,097 Module Upgrade : Starting module 'Core' 172.17.0.1 - - [28/May/2024:14:03:53 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3412 127.0.0.1 - - [28/May/2024:14:03:54 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:03:54 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3412 172.17.0.1 - - [28/May/2024:14:03:55 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3412 172.17.0.1 - - [28/May/2024:14:03:56 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3412 172.17.0.1 - - [28/May/2024:14:03:57 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3412 172.17.0.1 - - [28/May/2024:14:03:58 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3412 172.17.0.1 - - [28/May/2024:14:03:59 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3412 127.0.0.1 - - [28/May/2024:14:03:59 +0100] "GET /_/health HTTP/2.0" 200 15 INFO ModuleLoader 2024-05-28T14:04:00,071 Module Upgrade : Starting module 'affinityMaturationModule' INFO ModuleLoader 2024-05-28T14:04:00,072 Module Upgrade : Starting module 'Announcements' 172.17.0.1 - - [28/May/2024:14:04:00 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3413 INFO ModuleLoader 2024-05-28T14:04:00,511 Module Upgrade : Starting module 'antibodyModule' INFO ModuleLoader 2024-05-28T14:04:00,511 Module Upgrade : Starting module 'API' INFO ModuleLoader 2024-05-28T14:04:00,528 Module Upgrade : Starting module 'autoimmune' INFO ModuleLoader 2024-05-28T14:04:00,529 Module Upgrade : Starting module 'blindDateModule' INFO ModuleLoader 2024-05-28T14:04:00,530 Module Upgrade : Starting module 'chromatogramViewer' INFO ModuleLoader 2024-05-28T14:04:00,530 Module Upgrade : Starting module 'Crystallography' INFO ModuleLoader 2024-05-28T14:04:00,531 Module Upgrade : Starting module 'massSpecModule' INFO ModuleLoader 2024-05-28T14:04:00,531 Module Upgrade : Starting module 'massSpecReferenceDatabase' INFO ModuleLoader 2024-05-28T14:04:00,532 Module Upgrade : Starting module 'Pipeline' INFO SpringModule 2024-05-28T14:04:00,533 Module Upgrade : Loading Spring configuration for the Pipeline module from [/WEB-INF/pipelineContext.xml] INFO ModuleLoader 2024-05-28T14:04:00,875 Module Upgrade : Starting module 'plateWellViewer' INFO ModuleLoader 2024-05-28T14:04:00,876 Module Upgrade : Starting module 'prevalenceDashboard' INFO ModuleLoader 2024-05-28T14:04:00,877 Module Upgrade : Starting module 'Query' 172.17.0.1 - - [28/May/2024:14:04:01 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3357 WARN RoleManager 2024-05-28T14:04:01,228 Module Upgrade : Could not resolve the role org.labkey.api.security.roles.TrustedAnalystRole! The role may no longer exist, or may not yet be registered. INFO ModuleLoader 2024-05-28T14:04:01,228 Module Upgrade : Starting module 'Experiment' INFO SpringModule 2024-05-28T14:04:01,229 Module Upgrade : Loading Spring configuration for the Experiment module from [/WEB-INF/experimentContext.xml] 172.17.0.1 - - [28/May/2024:14:04:02 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3358 172.17.0.1 - - [28/May/2024:14:04:03 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3358 172.17.0.1 - - [28/May/2024:14:04:04 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3358 127.0.0.1 - - [28/May/2024:14:04:04 +0100] "GET /_/health HTTP/2.0" 200 15 172.17.0.1 - - [28/May/2024:14:04:05 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3358 172.17.0.1 - - [28/May/2024:14:04:06 +0100] "POST /admin-sql-getModuleStatus.view HTTP/1.1" 200 3358 FATAL ModuleLoader 2024-05-28T14:04:06,554 Module Upgrade : Startup failure, terminating java.lang.NullPointerException: Cannot invoke "org.labkey.api.exp.property.ValidatorKind.getName()" because the return value of "org.labkey.api.exp.property.PropertyService.getValidatorKind(String)" is null at org.labkey.experiment.api.property.DomainImpl$PropertyChangeAuditInfo.lambda$renderValidators$0(DomainImpl.java:1107) ~[experiment-23.11.11.jar:?] at java.base/java.lang.Iterable.forEach(Unknown Source) ~[?:?] at java.base/java.util.Collections$UnmodifiableCollection.forEach(Unknown Source) ~[?:?] at org.labkey.experiment.api.property.DomainImpl$PropertyChangeAuditInfo.renderValidators(DomainImpl.java:1106) ~[experiment-23.11.11.jar:?] at org.labkey.experiment.api.property.DomainImpl.save(DomainImpl.java:718) ~[experiment-23.11.11.jar:?] at org.labkey.experiment.api.property.DomainImpl.save(DomainImpl.java:521) ~[experiment-23.11.11.jar:?] at org.labkey.experiment.api.property.DomainImpl.save(DomainImpl.java:369) ~[experiment-23.11.11.jar:?] at org.labkey.api.audit.AbstractAuditTypeProvider.ensureProperties(AbstractAuditTypeProvider.java:252) ~[api-23.11.11.jar:?] at org.labkey.api.audit.AbstractAuditTypeProvider.initializeProvider(AbstractAuditTypeProvider.java:149) ~[api-23.11.11.jar:?] at org.labkey.api.audit.AbstractAuditTypeProvider.(AbstractAuditTypeProvider.java:109) ~[api-23.11.11.jar:?] at org.labkey.experiment.samples.SampleTimelineAuditProvider.(SampleTimelineAuditProvider.java:58) ~[experiment-23.11.11.jar:?] at org.labkey.experiment.ExperimentModule.startupAfterSpringConfig(ExperimentModule.java:509) ~[experiment-23.11.11.jar:?] at org.labkey.api.module.SpringModule.doStartup(SpringModule.java:122) ~[api-23.11.11.jar:?] at org.labkey.api.module.DefaultModule.startup(DefaultModule.java:229) ~[api-23.11.11.jar:?] at org.labkey.api.module.ModuleLoader.completeStartup(ModuleLoader.java:1668) ~[api-23.11.11.jar:?] at org.labkey.api.module.ModuleLoader.initiateModuleStartup(ModuleLoader.java:1607) ~[api-23.11.11.jar:?] at org.labkey.api.module.ModuleLoader.afterUpgrade(ModuleLoader.java:1824) ~[api-23.11.11.jar:?] at org.labkey.api.module.ModuleLoader.lambda$startNonCoreUpgradeAndStartup$13(ModuleLoader.java:1803) ~[api-23.11.11.jar:?] at org.labkey.api.module.ModuleUpgrader.lambda$upgrade$0(ModuleUpgrader.java:111) ~[api-23.11.11.jar:?] at java.base/java.lang.Thread.run(Unknown Source) [?:?] INFO ContextListener 2024-05-28T14:04:06,587 gApplicationShutdownHook : Calling DefaultFileWatcher shutdownPre() INFO FileSystemWatcherImpl 2024-05-28T14:04:06,588 DefaultFileWatcher : FileSystemWatcherThread is terminating INFO ContextListener 2024-05-28T14:04:06,588 gApplicationShutdownHook : Calling PollingFileWatcher shutdownPre() INFO FileSystemWatcherImpl 2024-05-28T14:04:06,589 PollingFileWatcher : FileSystemWatcherThread is terminating INFO ContextListener 2024-05-28T14:04:06,589 gApplicationShutdownHook : Calling QueryProfilerThread shutdownPre() INFO ContextListener 2024-05-28T14:04:06,591 gApplicationShutdownHook : Calling BreakpointThread shutdownPre() INFO ContextListener 2024-05-28T14:04:06,591 gApplicationShutdownHook : Calling ThumbnailGeneratingThread shutdownPre() INFO ContextListener 2024-05-28T14:04:06,592 gApplicationShutdownHook : Calling Job Runner (Default) shutdownPre() INFO ContextListener 2024-05-28T14:04:06,593 gApplicationShutdownHook : Calling Job Runner (Pipeline) shutdownPre() INFO ContextListener 2024-05-28T14:04:06,593 gApplicationShutdownHook : Calling QuerySnapshotDependencyThread shutdownPre() INFO ContextListener 2024-05-28T14:04:06,593 gApplicationShutdownHook : Calling HeartBeatThread shutdownPre() INFO ContextListener 2024-05-28T14:04:06,593 gApplicationShutdownHook : Calling Job Runner (Mothership Reporting) shutdownPre() INFO ContextListener 2024-05-28T14:04:06,593 gApplicationShutdownHook : Calling Temp table cleanup shutdownPre() INFO ContextListener 2024-05-28T14:04:06,594 gApplicationShutdownHook : Calling Temp file deletion shutdownPre() INFO ContextListener 2024-05-28T14:04:06,594 gApplicationShutdownHook : Calling Temp file cleanup shutdownPre() INFO ContextListener 2024-05-28T14:04:06,594 gApplicationShutdownHook : Calling Simple Metrics Service shutdownPre() INFO ContextListener 2024-05-28T14:04:06,594 gApplicationShutdownHook : Calling Action stats export shutdownPre() INFO DatasetSnapshotProvider 2024-05-28T14:04:06,595 SnapshotDependencyThread : QuerySnapshotDependencyThread is terminating due to interruption INFO CoreModule 2024-05-28T14:04:06,678 gApplicationShutdownHook : Completed logging statistics for actions prior to web application shut down INFO ContextListener 2024-05-28T14:04:06,679 gApplicationShutdownHook : Calling DefaultFileWatcher shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,680 gApplicationShutdownHook : Calling PollingFileWatcher shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,680 gApplicationShutdownHook : Calling QueryProfilerThread shutdownStarted() INFO QueryProfiler 2024-05-28T14:04:06,734 gApplicationShutdownHook : Completed logging statistics for queries prior to web application shut down INFO ContextListener 2024-05-28T14:04:06,744 gApplicationShutdownHook : Calling BreakpointThread shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,745 gApplicationShutdownHook : Calling ThumbnailGeneratingThread shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,745 gApplicationShutdownHook : Calling Job Runner (Default) shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,746 gApplicationShutdownHook : Calling Job Runner (Pipeline) shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,746 gApplicationShutdownHook : Calling QuerySnapshotDependencyThread shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,746 gApplicationShutdownHook : Calling HeartBeatThread shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,747 gApplicationShutdownHook : Calling Job Runner (Mothership Reporting) shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,747 gApplicationShutdownHook : Calling Temp table cleanup shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,748 gApplicationShutdownHook : Calling Temp file deletion shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,749 gApplicationShutdownHook : Calling Temp file cleanup shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,749 gApplicationShutdownHook : Calling Simple Metrics Service shutdownStarted() INFO ContextListener 2024-05-28T14:04:06,770 gApplicationShutdownHook : Calling Action stats export shutdownStarted() INFO EhCacheProvider 2024-05-28T14:04:07,146 gApplicationShutdownHook : Shutting down Ehcache