LabKey Server provides a broad range of tools for research using mass spectrometry techniques, including:
Targeted Mass Spectrometry
- Panorama - a web-based collaboration tool for Skyline targeted mass spectrometry documents
- Automating instrument quality control / system suitability
- Support for small molecule experiments
Documentation
Discovery Proteomics
Premium Resource - The ms2 module is a legacy feature set available to existing users of it with a Premium Edition of LabKey Server.
Learn more or
contact LabKey.
- Managing, analyzing, and sharing high volumes of tandem mass spectrometry data, employing open-source tools provided by the Trans Proteomic Pipeline, developed by the Institute for Systems Biology
- Searches against FASTA sequence databases using tools such as X! Tandem, Sequest, Mascot, or Comet
- Analysis by PeptideProphet and ProteinProphet
- Quantitation analysis on scored results using XPRESS and Q3
Documentation
You can find documentation of the ms2 module and accompanying legacy features in the documentation archives here:
