Credits

FilenameComponentSourceLicensePurpose
angus-activation-2.0.1.jarEclipse Angus ActivationEclipse FoundationEclipse Public License 2.0Implementation of the Jakarta Activation API
annotations-15.0.jarCompiler annotationsJetBrainsApache 2.0Annotations to enable compile-time checking for null
batik-codec-1.17.jarApache Batik CodecApacheApache 2.0FOP dependency
batik-transcoder-1.17.jarApache Batik TranscoderApacheApache 2.0FOP dependency
cglib-nodep-2.2.3.jarCode Generation LibrarySourceForgeApache 2.0Used by Spring Framework and jMock
commons-beanutils-1.9.4.jarCommons BeanutilsApacheApache 2.0Reading/writing beans
commons-codec-1.16.1.jarCommons CodecApacheApache 2.0Provides implementations of common encoders and decoders such as Base64, Hex, Phonetic and URLs
commons-collections4-4.4.jarCommons CollectionsApacheApache 2.0Helpful collections
commons-dbcp-1.4.jarCommons Database Connection PoolApacheApache 2.0Database connection pooling - Mondrian and TargetedMS dependency
commons-io-2.15.1.jarCommons I/OApacheApache 2.0I/O utility classes
commons-lang3-3.14.0.jarCommons LangApacheApache 2.0Language helpers
commons-logging-1.3.0.jarCommons LoggingApacheApache 2.0Bridge API to different logging implementations
commons-pool-1.6.jarCommons PoolApacheApache 2.0Object pooling - Pipeline & TargetedMS dependency
commons-validator-1.8.0.jarCommons ValidatorApacheApache 2.0Data validation and error messages
core-renderer-R8.jarFlyingSaucerFlyingSaucerLGPLXHTML/CSS rendering library
dd-trace-api-1.30.1.jarDatadog Trace API clientDatadogApache 2.0Integrations to pass trace_ids and other info to Datadog
ehcache-core-2.6.8.jarEhcacheTerracottaApache 2.0Caching library
fop-2.9.jarFormatting Objects Processor (FOP)ApacheApache 2.0Used to export SVG visualizations to image and PDF formats
guava-33.0.0-jre.jarGuava: Google Core Libraries for Javaguava-librariesApache 2.0Collections Library
gwt-servlet-jakarta-2.11.0.jarServer Support for Google Web ToolkitGoogleApache 2.0Support for rich web apps
hamcrest-2.2.jarHamcrestJava HamcrestNew BSD LicenseLibrary for writing declarative matches for testing
httpclient-4.5.14.jarApache HTTP ClientApacheApache 2.0HTTP client for requests of remote servers
httpcore-4.4.16.jarApache HTTP CoreApacheApache 2.0HTTP core library, HttpClient dependency
httpclient5-5.3.1.jarApache HTTP ClientApacheApache 2.0HTTP client for requests of remote servers
httpcore5-5.2.4.jarApache HTTP CoreApacheApache 2.0HTTP core library, HttpClient dependency
jackson-annotations-2.16.1.jarJackson Annotations LibraryJacksonApache 2.0JSON de/serialization, reporting API dependency
jackson-core-2.16.1.jarJackson Core LibraryJacksonApache 2.0JSON de/serialization, reporting API dependency
jackson-databind-2.16.1.jarJackson Databind LibraryJacksonApache 2.0JSON de/serialization, reporting API dependency
jackson-datatype-json-org-2.16.1.jarJackson support for org.jsonJacksonApache 2.0Jackson support for org.json data types, to ease migration out of code that uses them
jackson-datatype-jsr310-2.16.1.jarJackson support for org.jsonJacksonApache 2.0Add-on module to support JSR-310 (Java 8 Date & Time API) data types
jama-1.0.3.jarJava Matrix PackageMathWorks & NISTPublic DomainLinear regressions for hydrophobicity
jfreechart-1.0.19.jarJFreeChartJFreeChartLGPLCharting
jmock-2.6.0.jarjMockjMockjMock Project LicensejMock mock object testing framework
jmock-legacy-2.6.0.jarjMockjMockjMock Project LicensejMock mock object testing framework
json-20231013.jarJSON in JavaJSON-javaPublic DomainJSON library
jsoup-1.17.2.jarJSoupJonathan HedleyMITValidating HTML content
junit-4.13.2.jarJUnitJunitCPL 1.0Unit testing
jxl-2.6.3.jarAPIjexcelapiLGPLJava Excel library
kaptcha-2.3.jarCaptcha generatorkaptchaApache 2.0User signup forms
log4j-api-2.23.0.jarLog4jApacheApache 2.0Logging
log4j-core-2.23.0.jarLog4jApacheApache 2.0Logging
opentracing-api-0.33.0.jarOpenTracing Java APIOpenTracingApache 2.0Standard telemetry/tracing APIs, used with Datadog
opentracing-util-0.33.0.jarOpenTracing Java UtilOpenTracingApache 2.0Standard telemetry/tracing APIs, used with Datadog
pdfbox-2.0.29.jarApache PDFBox®PDFBoxApache 2.0Extract text and produce thumbnails from PDFs
poi-5.2.3.jarApache POIApacheApache 2.0Extracting text from and exporting to Microsoft document formats (Excel, Word, PowerPoint, etc.)
poi-ooxml-5.2.3.jarApache POI OOXMLApacheApache 2.0POI support for OOXML formats
pollingwatchservice-0.2.0.jarPolling Watch ServiceimcaBSD 2-Clause licenseProvide polling file watcher for cifs file systems
postgresql-42.7.2.jarPostgreSQL JDBC Driverjdbc.postgresql.orgBSDConnect with PostgreSQL database servers
quartz-2.3.2.jarquartzquartzApache 2.0Scheduling
rengine-0.6-8.1.jarRengineRserveLGPLR client classes
rserve-0.6-8.1.jarRserveRserveLGPLLibrary to connect to an R Server
jsr223-js-engine-Aug2008.jarJSR-223 ScriptEngine for RhinoScripting ProjectBSDJSR-223 ScriptEngine APIs for Rhino
rhino-1.7R3.jarMozilla RhinoMozilla RhinoMPL 1.1Embedded JavaScript engine
rome-2.1.0.jarROMEROMEApache 2.0Support for RSS and Atom aggregation
spring-beans-6.1.4.jarSpring FrameworkSpringApache 2.0spring-webmvc.jar dependency
spring-context-6.1.4.jarSpring FrameworkSpringApache 2.0spring-webmvc.jar dependency
spring-core-6.1.4.jarSpring FrameworkSpringApache 2.0spring-webmvc.jar dependency
spring-jdbc-6.1.4.jarSpring FrameworkSpringApache 2.0SQL exceptions and errors
spring-test-6.1.4.jarSpring FrameworkSpringApache 2.0Object instantiation framework
spring-tx-6.1.4.jarSpring FrameworkSpringApache 2.0DAO and transactions
spring-web-6.1.4.jarSpring FrameworkSpringApache 2.0Basis of web framework
spring-webmvc-6.1.4.jarSpring FrameworkSpringApache 2.0spring-webmvc.jar dependency
thumbnailator-0.4.8.jarThumbnailatorthumbnailatorMITThumbnail generator
tika-core-2.9.1.jarTikaApacheApache 2.0Just detection of file content types and extraction of text (no parsers)
jakarta.validation-api-3.0.2.jarBean Validation API (JSR 303)JCPApache 2.0Validation of objects, requirement of GWT
xercesImpl-2.12.2.jarXercesApacheApache 2.0dependents: flow module, batik library
xmlbeans-5.2.0.jarXMLBeansApacheApache 2.0Reading/writing XML
FilenameComponentSourceLicensePurpose
mssql-jdbc-12.4.2.jre11.jarMicrosoft JDBC Driver for SQL ServerMicrosoftMITConnect with Microsoft SQL Server database servers
ojdbc11-23.3.0.23.09.jarOracle JDBC DriverOracleOracle Free Use LicenseConnect with Oracle database servers
mysql-connector-j-8.3.0.jarMySQL JDBC DriverMySQLGPL v2 with Universal FOSS ExceptionConnect with MySQL database servers
FilenameComponentSourceLicensePurpose
com_hfg-20240223.jarcom-hfgcom-hfgLGPL 2.1Utility library required for CoreAb
CoreAb-20240222.jarCoreAbprivateproprietaryLibrary for classifying proteins and other utilities
cdk-depict-2.7.1.jarcdk-depictcdk-depictLGPL 2.1Library for chemoinformatics and bioinformatics
cdk-formula-2.7.1.jarcdk-formulacdk-formulaLGPL 2.1Library for chemoinformatics and bioinformatics
FilenameComponentSourceLicensePurpose
jakarta.xml.bind-api-2.3.3.jarJakarta XML Binding APIEclipseEclipse Distribution License v1.0Parsing XML
aws-s3-2.5.0.jarApache JCloudsApache JCloudsApache 2.0JClouds implementation of S3
filesystem-2.5.0.jarApache JCloudsApache JCloudsApache 2.0JClouds implementation of blobstore
jclouds-blobstore-2.5.0.jarApache JCloudsApache JCloudsApache 2.0JClouds components to access blobstore
jclouds-core-2.5.0.jarApache JCloudsApache JCloudsApache 2.0JClouds core components
s3-2.5.0.jarApache JCloudsApache JCloudsApache 2.0JClouds components to access an implementation of S3
aws-sqs-2.5.0.jarApache JCloudsApache JCloudsApache 2.0JClouds implementation of AWS SQS Client
sqs-2.5.0.jarApache JCloudsApache JCloudsApache 2.0JClouds components to access an implementation of SQS
s3fs-2.2.2.16.jarAmazon S3 File SystemAmazon S3 File SystemAmazon S3FSAccess S3 as a file system
aws-java-sdk-s3-1.12.262.jarAWS Java SDK for Amazon S3AWS Java SDK for Amazon S3AWS Java SDK for Amazon S3S3EventNotification object for processing events
FilenameComponentSourceLicensePurpose
bcprov-jdk18on-1.77.jarBouncy Castle Crypto packageBouncyCastleMIT-likeCryptography, including certificate generation
bcpkix-jdk18on-1.77.jarBouncy Castle Java APIsBouncyCastleMIT-likeJava APIs for CMS, PKCS, EAC, TSP, CMP, CRMF, OCSP, and certificate generation
FilenameComponentSourceLicensePurpose
commons-math3-3.6.1.jarCommons MathApacheApache 2.0Lightweight, self-contained mathematics and statistics components
radeox-1.0.5.jarRadeoxRadeoxLGPLWiki renderer
js-scriptengine-23.1.2.jarGraalJSGraalJSUniversal Permissive LicenseServer-side JavaScript evaluation
FilenameComponentSourceLicensePurpose
docker-java-3.3.0.jarDocker management APIgithubApache 2.0Docker API
jackson-jaxrs-json-provider-2.16.1.jarJackson JAXRS: JSON Apache 2.0 
jakarta.xml.bind-api-2.3.3.jarJakarta XML Binding APIEclipseEclipse Distribution License v1.0Parsing XML
jaxb-impl-2.3.3.jarJava Architecture for XML Binding (JAXB)OracleCDDLParsing XML
FilenameComponentSourceLicensePurpose
commons-math3-3.6.1.jarCommons MathApacheApache 2.0Lightweight, self-contained mathematics and statistics components
FilenameComponentSourceLicensePurpose
commons-math3-3.6.1.jarCommons MathApacheApache 2.0Lightweight, self-contained mathematics and statistics components
FilenameComponentSourceLicensePurpose
totp-1.7.1.jarJava TOTPjavatotpMITTime-based One Time Password (MFA) Library for Java
FilenameComponentSourceLicensePurpose
sqlite-jdbc-3.45.1.0.jarSQLite JDBC Driverbitbucket.orgApache 2.0SQLite JDBC Driver
FilenameComponentSourceLicensePurpose
activemq-client-5.18.3.jarApache ActiveMQ ClientApacheApache 2.0Java Message Service queuing
activemq-broker-5.18.3.jarApache ActiveMQ BrokerApacheApache 2.0Java Message Service queuing
commons-lang-2.6.jarCommons LangApacheApache 2.0Language helpers; older version required by Mule
dom4j-2.1.4.jarDOM4JDOM4JBSD StylePipeline (Mule XML parsing)
geronimo-j2ee-connector_1.5_spec-1.0.1.jarJ2EE Connector APIApache GeronimoApache 2.0J2EE Connector API classes
jug-2.0.0-asl.jarJugSafehausApache 2.0Java UUID generator
mule-module-builders-1.4.4e.jarMule Enterprise Service BusMuleSoftCommon Public Attribution License Version 1.0Enterprise service bus implementation
xstream-1.4.20.jarXStreamThoughtworksBSDPipeline (Mule dependency)
backport-util-concurrent-2.1.jarSpringSource Edu Emory Mathcs BackportEmory UniversityPublic DomainPipeline (Mule dependency)
FilenameComponentSourceLicensePurpose
api-all-2.1.3.jarApache LDAP APIApache DirectoryApache 2.0Used by LDAP Sync
FilenameComponentSourceLicensePurpose
log4j-1.2-api-2.23.0.jarLog4jApacheApache 2.0Logging
antlr-3.5.2.jarANTLRANTLRBSDQuery language parsing
eigenbase-properties-1.1.6.jarMondrianPentahoEclipse Public License - v 1.0Part of Mondrian distribution
eigenbase-resgen-1.3.7.jarMondrianPentahoApache 2.0Part of Mondrian distribution
mondrian-9.4.0.1-465.jarMondrianPentahoEclipse Public License - v 1.0Part of Mondrian distribution
olap4j-1.2.0.jarMondrianPentahoApache 2.0Part of Mondrian distribution
FilenameComponentSourceLicensePurpose
zjsonpatch-0.4.3.jarRecipezjsonpatchApache 2.0RFC 6902 JSON Patch
FilenameComponentSourceLicensePurpose
redshift-jdbc42-2.1.0.26.jarAmazon Redshift JDBC DriverAmazon Redshift Download PageApache 2.0Provides connectivity to Redshift databases
FilenameComponentSourceLicensePurpose
opensaml-core-4.0.1.jarSAMLOpenSAML 3Apache 2.0SAML Service Provider functionality
opensaml-saml-api-4.0.1.jarSAMLOpenSAML 3Apache 2.0SAML Service Provider functionality
opensaml-saml-impl-4.0.1.jarSAMLOpenSAML 3Apache 2.0SAML Service Provider functionality
opensaml-security-api-4.0.1.jarSAMLOpenSAML 3Apache 2.0SAML Service Provider functionality
opensaml-xmlsec-api-4.0.1.jarSAMLOpenSAML 3Apache 2.0SAML Service Provider functionality
opensaml-xmlsec-impl-4.0.1.jarSAMLOpenSAML 3Apache 2.0SAML Service Provider functionality
jakarta.xml.bind-api-2.3.3.jarJakarta XML Binding APIEclipseEclipse Distribution License v1.0Parsing XML
jaxb-impl-2.3.3.jarJava Architecture for XML Binding (JAXB)OracleCDDLParsing XML
bcprov-jdk18on-1.77.jarBouncy Castle Crypto packageBouncyCastleMIT-likeCryptography, including certificate generation
bcpkix-jdk18on-1.77.jarBouncy Castle Java APIsBouncyCastleMIT-likeJava APIs for CMS, PKCS, EAC, TSP, CMP, CRMF, OCSP, and certificate generation
FilenameComponentSourceLicensePurpose
lucene-analysis-common-9.10.0.jarLucene AnalyzersApacheApache 2.0Stemming support for full-text search
lucene-core-9.10.0.jarLuceneApacheApache 2.0Full-text search
lucene-queryparser-9.10.0.jarLucene Query ParsersApacheApache 2.0Query parser support for full-text search
tika-parsers-standard-package-2.9.1.jarTikaApacheApache 2.0Placeholder parser
tika-parser-apple-module-2.9.1.jarTikaApacheApache 2.0Parser adapters for Apple-related file formats
tika-parser-code-module-2.9.1.jarTikaApacheApache 2.0Parser adapters for code file formats
tika-parser-html-module-2.9.1.jarTikaApacheApache 2.0Parser adapter for HTML file format
tika-parser-image-module-2.9.1.jarTikaApacheApache 2.0Parser adapters for image file formats
tika-parser-microsoft-module-2.9.1.jarTikaApacheApache 2.0Parser adapters for Microsoft file formats
tika-parser-miscoffice-module-2.9.1.jarTikaApacheApache 2.0Parser adapters for Microsoft file formats
tika-parser-pdf-module-2.9.1.jarTikaApacheApache 2.0Parser adapters for PDF file format
tika-parser-pkg-module-2.9.1.jarTikaApacheApache 2.0Parser adapter for various package formats
tika-parser-text-module-2.9.1.jarTikaApacheApache 2.0Parsers and parser adapters for simple text file formats
tika-parser-xml-module-2.9.1.jarTikaApacheApache 2.0Parser adapter for XML file format
tika-parser-xmp-commons-2.9.1.jarTikaApacheApache 2.0Parser adapter for XMP file format
tika-parser-zip-commons-2.9.1.jarTikaApacheApache 2.0Parser adapters for ZIP file formats
commons-compress-1.26.0.jarCommons CompressApacheApache 2.0Utilities for working with compressed files
xz-1.9.jarXZ for Javatukaani.orgpublicTransitive dependency of commons-compress to support additional compression types for search
jempbox-1.8.17.jarjempboxApacheApache 2.0PDFBox dependency
metadata-extractor-2.18.0.jarMetadata ExtractordrewnoakesApache 2.0Parsers that read metadata from image files
poi-scratchpad-5.2.3.jarApache POI OOXMLApacheApache 2.0Parsers for older Microsoft document formats (e.g., PPT, DOC, VSD, PUB)
tagsoup-1.2.1.jarTagSoupTagSoupApache 2.0Parser for HTML/XML
jhighlight-1.1.0.jarJHighlightcodelibsCDDLParsers for Java, HTML, XHTML, XML and LZX
commons-csv-1.10.0.jarCommons CSV ™ApacheApache 2.0Parsing CSV files via Tika
apache-mime4j-core-0.8.10.jarApache James Mime4JApacheApache 2.0Parser for email messages
apache-mime4j-dom-0.8.10.jarApache James Mime4JApacheApache 2.0Parser for email messages
pdfbox-2.0.29.jarApache PDFBox®PDFBoxApache 2.0Extract text and produce thumbnails from PDFs
pdfbox-tools-2.0.29.jarPDFBox ToolsPDFBoxApache 2.0PDFBox dependency
dd-plist-1.27.jarDD Plistcom.dd.plistMITNeeded to parse "pages" files for full-text search
asm-9.6.jarASMASMNew BSD LicenseAll purpose Java bytecode manipulation and analysis framework
FilenameComponentSourceLicensePurpose
protobuf-java-3.25.3.jarProtocol BuffersGithub GoogleCustomBinary data parsing
sqlite-jdbc-3.45.1.0.jarSQLite JDBC Driverbitbucket.orgApache 2.0SQLite JDBC Driver
commons-math3-3.6.1.jarCommons MathApacheApache 2.0Lightweight, self-contained mathematics and statistics components
jcommon-1.0.23.jarJFree ChartJFreeChartLGPLPNG encoder
FilenameComponentVersionSourceLicenseLabKey DevPurpose
javax.activation.jarJakarta Activation™1.2.2EclipseEclipse Public License 2.0adamJakarta Mail and JAXB dependency
mail.jarJakarta Mail™1.6.7EclipseEclipse Public License 2.0adamSend email from LabKey Server
LibraryVersionSourceLicenseLabKey DevPurpose
clipboard.js1.5.9clipboard.jsMITnickaA modern approach to copy text to clipboard
CodeMirror4.20codemirror.netMITklumbrowser based code editor
Crossfilter1.3.11https://github.com/square/crossfilterApache 2.0nickaFast Multidimensional Filtering for Coordinated Views
Crystal Project icons everaldo.comLGPLmbellewdocument, action, and other icons
d33.5.17d3js.orgMichael BostockcnatheA JavaScript visualization library for HTML and SVG
d3pie0.1.8d3pieMITcnatheData visualization script built on d3.js for pie charts
doT.js1.0.1github.com/olado/doTMITkevinkA small, fast JavaScript templating library used by the MiniProfiler
Ext JS3.4Ext JSGPL v3 with Ext FLOSS ExceptionnickaAjax Support, Various UI widgets
Ext JS4.2.1Ext JSGPL v3 with Ext FLOSS ExceptionnickaAjax Support, Various UI widgets
Font Awesome4.4.0Font AwesomeMIT and SIL OFL 1.1nickaThe iconic font and css toolkit
GROUP_CONCAT1.00.23696GROUP_CONCAT for SQL ServerMS-PLadamGROUP_CONCAT CLR aggregate function for Microsoft SQL Server
hexbin Hexagonal BinningMichael BostocknickaImplements hexagonal binning, useful for aggregating data into a more coarse representation suitable for display
hopscotch0.3.1github/linkedinApache 2.0mbellewWeb site tutorials and callouts
JQuery-menu-aim1.1https://github.com/kamens/jQuery-menu-aimMITnickaLibrary to add menu aim option for the experimental nav bar
LovCombo1.3Ext.ux.form.LovComboLGPLkevinkMulti-select ("List Of Values") combo box widget for Ext JS
markdown-it8.3.1markdown-itMITkevinkMarkdown renderer for wikis, etc.
MultiSelectTreePanel1.1Ext.ux.MultiSelectTreePanelGPL v3 with Ext FLOSS ExceptionnickaMulti-select tree panel that includes "drag and drop" capabilities for Ext JS
Slider1.0SliderApache 2.0nickaBasis for the range slider used for m/z range filter
stacktrace.js2.0.2stacktrace.jsPublic DomainkevinkFramework-agnostic, micro-library for getting stack traces in all web browsers
TinyMCE6.7.3TinyMCEMITiansHTML WYSIWYG editor
LibraryVersionSourceLicenseLabKey DevPurpose
Dropzone.js3.8.4dropzone.jsMITkevinkdrag-drop file upload functionality
LibraryVersionSourceLicenseLabKey DevPurpose
Lorikeet Spectrum Viewer0.3http://code.google.com/p/lorikeet/MIT LicensejeckelsMS2 spectra viewer
JQuery UI1.8.4http://docs.jquery.com/UIMIT LicensejeckelsDependency of Lorikeet
LibraryVersionSourceLicenseLabKey DevPurpose
Data Tables1.10.13https://datatables.net/MIT LicensevsharmaUsed for conflict resolution tables in Library folders
LibraryVersionSourceLicenseLabKey DevPurpose
JSR-223 ScriptEngine for RhinoAug. 8th, 2008Scripting ProjectBSDkevinkJSR-223 ScriptEngine APIs for Rhino
RingoJS0.4.0RingoJSApache 2.0kevinkScriptableMap and ScriptableList wrapper classes
LibraryVersionSourceLicenseLabKey DevPurpose
edu.stanford.facs.transform1.0flowcyt.sf.netedu/stanford/facs/transform/package.htmlkevinkData Transforms for Cytometry
LibraryVersionSourceLicenseLabKey DevPurpose
Duo Web Java/JS Toolkit1d8741bc8eduowebLicensebpatelDuo Two Factor Authentication
LibraryVersionSourceLicenseLabKey DevPurpose
OneLogin SAML Toolkit for Java65ce16edfjava-samlLicensetchadSAML Service Provider functionality
FilenameComponentVersionSourceLicenseLabKey DevPurpose
dot.exe
freetype6.dll
jpeg.dll
png.dll
z.dll
Graphviz2.2.1AT&T ResearchCommon PublicjeckelsRenders trees of objects
zlib1.dllZlib1.2.3.2027ZlibZlib LicensejeckelsCompression library used by Graphviz.
libexpat.dll
libexpatw.dll
ExpatN/AExpat ProjectMIT LicensejeckelsOpen source XML SAX-parser used by Graphviz.