CPAS/SmallICAT (ICATSrch): /home/Demos/CPAS/demo/icat

CPAS/SmallICAT (ICATSrch)

icat

Standard Properties

Name	CPAS/SmallICAT (ICATSrch)
Protocol	X!Tandem Analysis
Job Id
Created	2006-06-15 16:44
Modified	2006-06-15 16:44
Comments
Replaced By
Replaces

Run Details

Download all files Export XAR

Graph Summary View

Graph Detail View

Data Inputs

Data Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Role Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
SmallICAT.mzXML	Spectra
Tandem Settings	SearchConfig
150Proteins.fsa	FASTA

Material Inputs

Material Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Role Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
No data to show.

Data Outputs

Data Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Role Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
Protein Prophet scores	Data

Material Outputs

Material Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Role Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
No data to show.

Protocol Applications

Name	Inputs	Outputs
XTandem analysis run	150Proteins.fsa SmallICAT.mzXML Tandem Settings
X!Tandem Database Search	150Proteins.fsa SmallICAT.mzXML Tandem Settings	XTandem Search Results
Convert to PepXml	XTandem Search Results	PepXml/XTandem Search Results
Peptide Prophet	PepXml/XTandem Search Results	Scored Search Results
Protein Prophet	Scored Search Results	Protein Prophet scores
Run Output	Protein Prophet scores

Run Group Memberships

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