Protocol Step: X!Tandem Analysis: /home/Demos/CPAS/labelfreedemo/ms1ms2matching

Protocol Step: X!Tandem Analysis

ms1ms2matching

Standard Properties

Name	X!Tandem Analysis
Contact
Instrument
Software
Description	Use X!Tandem to search for peptides in one mzXml file
Max input data per instance
Max input material per instance
Output data per instance
Output material per instance

Custom Properties

Category

xtandem

Protocol Parameters

ApplicationLSIDTemplate	${RunLSIDBase}:MS2.XTandemAnalysis
ApplicationNameTemplate	XTandem analysis run

Protocol Details

Material Inputs

Name Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Sample Set Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
No data to show.

Data Inputs

Name Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Data Class Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
No data to show.

Material Outputs

Name Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Sample Set Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
No data to show.

Data Outputs

Name Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Data Class Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart
No data to show.

Protocol Predecessors

Name	Predecessor Sequence Sort Ascending Sort Descending Clear Sort Filter... Clear Filter	Description
X!Tandem Analysis	1	Use X!Tandem to search for peptides in one mzXml file

Protocol Successors

Name	Action Sequence Sort Ascending Sort Descending Clear Sort Filter... Clear Filter	Description
X!Tandem Analysis	1	Use X!Tandem to search for peptides in one mzXml file
XTandem analysis	50