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HIV Study Tutorial
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"labkey.log" attached to message "Error while running trigger script"

INFO ScriptService$Console 2020-04-07 17:59:07,547 io-127.0.0.1-8080-exec-4 : ** evaluating: queries/study/BasicsCase.js INFO ScriptService$Console 2020-04-07 17:59:07,584 io-127.0.0.1-8080-exec-4 : Getting entries in BasicsCase, success: 33 rows returned. INFO ScriptService$Console 2020-04-07 17:59:07,584 io-127.0.0.1-8080-exec-4 : Selected rows BasicsCase: INFO ScriptService$Console...

Data_2023-04-26_15-45-06.xlsx

data Sample Id Day Media Cell Count Lab Technician Incubator/Instrument Run QC Flags 101 1 control 1 SteveO INC-001 CellCulture-Group1 Not Yet Reviewed 101 2 control 1 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 3 control 2 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 4 control 2 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 5 control 2 Molly O INC-001 CellCulture-Group1...

Data_2023-04-26_15-45-06.xlsx

data Sample Id Day Media Cell Count Lab Technician Incubator/Instrument Run QC Flags 101 1 control 1 SteveO INC-001 CellCulture-Group1 Not Yet Reviewed 101 2 control 1 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 3 control 2 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 4 control 2 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 5 control 2 Molly O INC-001 CellCulture-Group1...

06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

Sample ID Naming

Each sample in the system must have a unique name/id within its Sample Type. The unique sample names can be provided by the user, or can be generated by the system. When you ask the system to generate names, you specify a naming pattern to use. For each type of sample, you will choose one of these two options. If you already use a unique naming structure outside the system, you will want to ensure...

dataset5006.tsv

ParticipantId date QCStateLabel HIVWestern HIVStdAntibody HIVLoadIneq HIVLoadQuant HIVLoadQual HIVRapidTest HIVSourceLab 103866 2008-04-30 00:00:00.0 0 103866 2008-05-28 00:00:00.0 183255 103866 2008-06-25 00:00:00.0 38618 103866 2008-07-23 00:00:00.0 7774 103866 2008-08-20 00:00:00.0 3125 103866 2008-09-17 00:00:00.0 2489 103866 2008-11-12 00:00:00.0 ...

"20070928_ApoA1_Cathepsin_FTCID_01.xtan.xml" attached to message "run X!Tandem without TPP"

IPI00021841 IPI:IPI00021841.1|SWISS-PROT:P02647|TREMBL:Q6LEJ8;Q9UCT8|ENSEMBL:ENSP00000236850;ENSP00000352471;ENSP00000364469;ENSP00000364472;ENSP00000364478|REFSEQ:NP_000030|VEGA:OTTHUMP00000043268;OTTHUMP00000069346;OTTHUMP00000069347;OTTHUMP00000069348 Tax_Id=9606 Gene_Symbol=APOA1 Apolipoprotein A-I precursor MKAAVLTLAV LFLTGSQARH FWQQDEPPQS PWDRVKDLAT VYVDVLKDSG RDYVSQFEGS ALGKQLNLKL...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12a-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12a-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12a Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

"MFL05-021507-02000727_100906.log" attached to message "ERROR: XMLStreamException in next() com.ctc.wstx.exc.WstxParsingException: Unexpected close tag </search_summary>; expected </parameter>."

17 Apr 2007 13:32:46,576 INFO : X! Tandem search for MFL05-021507-02000727_100906.mzXML 17 Apr 2007 13:32:46,584 INFO : ======================================= 17 Apr 2007 13:32:47,032 INFO : tandem.exe output 17 Apr 2007 13:32:47,034 INFO : ======================================= 17 Apr 2007 13:32:47,036 INFO : running: tandem.exe input.xml 17 Apr 2007 13:32:47,396 INFO : 17 Apr 2007 13:32:47,400...

"CompareRuns_QueryBeta_2007-11-16 12_40_25.034.xls" attached to message "IPI repeated in Search Engine Comparison"

data Best Name Seq Id Description First IPI interact-GLHDLT5D.pep.xml (interact-GLHDLT5D.prot.xml) Group interact-GLHDLT5D.pep.xml (interact-GLHDLT5D.prot.xml) Prob interact-GLHDLT5D.pep.xml (interact-GLHDLT5D.prot.xml) Peptides interact-GLHDLT5C.pep.xml (interact-GLHDLT5C.prot.xml) Group interact-GLHDLT5C.pep.xml (interact-GLHDLT5C.prot.xml) Prob interact-GLHDLT5C.pep.xml (interact-GLHDLT5C.prot.xml)...

"F004268.dat" attached to message "Mascot2XML"

MIME-Version: 1.0 (Generated by Mascot version 1.0) Content-Type: multipart/mixed; boundary=gc0p4Jq0M2Yt08jU534c0p --gc0p4Jq0M2Yt08jU534c0p Content-Type: application/x-Mascot; name="parameters" LICENSE=Licensed to: British Columbia Cancer Research Centre, Genome Sciences Ctr. (0262), (6 processors). MP= NM= COM=Submitted from Nobu's samples by Mascot Daemon on PROTEOMICS-1 (blank 005) IATOL= IA2TOL=...

07-12A81-IgA-Biotin.xls

ENV1 (31) File Name: 07-12A81-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 25-Jun-2011, 01:21 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 07-12A81 Signed By: Steve Hanson Document ID: 9996 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

07-12A81-IgA-Biotin.xls

ENV1 (31) File Name: 07-12A81-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 25-Jun-2011, 01:21 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 07-12A81 Signed By: Steve Hanson Document ID: 9996 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...