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HIV Study Tutorial
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"errorlog.txt" attached to message "Uniqueness problem when saving to two datasets"

SELECT ObjectId, Properties_ParticipantID, Properties_SpecimenID, Properties_DrawDate, Properties_HAIResDate, Properties_HAI_H1N12009, DataId FROM (SELECT Object.objectid AS ObjectId, Object.objectid AS Properties, Object.DataId AS DataId, CAST((SELECT StringValue FROM exp.ObjectProperty WHERE exp.ObjectProperty.PropertyId = 1235 AND exp.ObjectProperty.ObjectId = Object.objectid) AS VARCHAR(4000))...

"cpas.log" attached to message "sample-0.00-1.00.sql: Failed to load DbSchema "sample""

19 Jan 2006 15:00:05,481 DEBUG ModuleLoader : ModuleLoader init 19 Jan 2006 15:00:05,613 DEBUG CoreModule : Ensuring databases are present 19 Jan 2006 15:00:05,738 DEBUG CoreModule : Successful connection to cpasDataSource at jdbc:postgresql://localhost:5432/cpas 19 Jan 2006 15:00:05,810 INFO DbSchema : Loading DbSchema "core" from "PostgreSQL" at "jdbc:postgresql://localhost:5432...

10-13A12-IgA-Biotin.xls

ENV1 (31) File Name: 10-13A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 15-Jul-2011, 01:37 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 10-13A12 Signed By: Elizabeth Van Nostrand Document ID: 9997 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100...

10-13A12-IgA-Biotin.xls

ENV1 (31) File Name: 10-13A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 15-Jul-2011, 01:37 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 10-13A12 Signed By: Elizabeth Van Nostrand Document ID: 9997 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100...

10-13A12-IgA-Biotin.xls

ENV1 (31) File Name: 10-13A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 15-Jul-2011, 01:37 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 10-13A12 Signed By: Elizabeth Van Nostrand Document ID: 9997 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100...

10-13A12-IgA-Biotin.xls

ENV1 (31) File Name: 10-13A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 15-Jul-2011, 01:37 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 10-13A12 Signed By: Elizabeth Van Nostrand Document ID: 9997 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100...

"running threads.txt" attached to message "NCBI database - annotatins problem?"

Currently Running Threads ajp-8009-Acceptor-0 (RUNNABLE) ajp-8009-Poller-0 (WAITING) ajp-8009-Poller-1 (WAITING) ajp-8009-Poller-2 (WAITING) ajp-8009-Poller-3 (WAITING) ajp-8009-Poller-4 (WAITING) ajp-8009-Poller-5 (WAITING) ajp-8009-Poller-6 (WAITING) ajp-8009-Poller-7 (WAITING) AnnotLoader7 (WAITING) AnnotLoader8 (WAITING) AWT-Windows (RUNNABLE) BreakpointThread (TIMED_WAITING) ContainerBackgroundProcessor[StandardEngine[Catalina]]...

"getContainers-atlas-test.txt" attached to message "Strange behavior with LABKEY.Security.getContainers() function"

https://atlas-test.scharp.org/cpas/project/HVTN/Specimen%20Management/Lab%20Program/begin.view? https://atlas-test.scharp.org/cpas/project/HVTN/getContainers.view?_dc=1348616911600&container=%2FHVTN%2FSpecimen%20Management%2FLab%20Program%2F&includeSubfolders=false _dc=1348616911600 container=/HVTN/Specimen Management/Lab Program/ includeSubfolders=false { "sortOrder": 0, "children": [...

HIV Disease Progression - Demo Study-Lab Results-2019-04-11-0948.tsv

ParticipantId sourcelsid date Day DataSets/Demographics/Gender oldcd4 Lymphocytes Hemoglobin DataSets/Demographics/Group DataSets/Demographics/TreatmentGroup CD4 119180 4/20/2008 0 f 239 1802 17 Group 1: Acute HIV-1 No ARV 119.5 119180 5/18/2008 28 f 266 1787 18 Group 1: Acute HIV-1 No ARV 133 119180 6/15/2008 56 f 224 1843 19 Group 1: Acute HIV-1 No ARV 112 119180 7/13/2008 84 f 163 1780 17 Group...

lin_384_well_metadata.xls

data SampleWellGroup PlateLocation SpecimenID ParticipantID VisitID Date SampleDescription Lot Number InitialDilution Factor Method Specimen 1 A3-A4 4E10 Antibody Lot 1 10 3 Concentration Specimen 2 B3-B4 2F5 Antibody Lot 1 10 3 Concentration Specimen 3 C3-C4 2G12 Antibody Lot 1 10 3 Concentration Specimen 4 D3-D4 sCD4 Antibody Lot 1 10 3 Concentration Specimen 5 E3-E4 HIVIG Antibody...

Data_2023-04-26_15-45-06.xlsx

data Sample Id Day Media Cell Count Lab Technician Incubator/Instrument Run QC Flags 101 1 control 1 SteveO INC-001 CellCulture-Group1 Not Yet Reviewed 101 2 control 1 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 3 control 2 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 4 control 2 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 5 control 2 Molly O INC-001 CellCulture-Group1...

Data_2023-04-26_15-45-06.xlsx

data Sample Id Day Media Cell Count Lab Technician Incubator/Instrument Run QC Flags 101 1 control 1 SteveO INC-001 CellCulture-Group1 Not Yet Reviewed 101 2 control 1 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 3 control 2 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 4 control 2 Molly O INC-001 CellCulture-Group1 Not Yet Reviewed 101 5 control 2 Molly O INC-001 CellCulture-Group1...

01-11A12-IgA-Biotin-1.xls

ENV1 (31) File Name: 01-11A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12 Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12 Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

09-16A32-IgA-Biotin.xls

ENV1 (31) File Name: 09-16A32-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 14-Jul-2011, 01:08 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 09-16A32 Signed By: Josh Eckels Document ID: 9910 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

01-11A12-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12 Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

01-11A12-IgA-Biotin.xls

ENV1 (31) File Name: 01-11A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 21-Jun-2011, 01:47 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 01-11A12 Signed By: Elizabeth Nelson Document ID: 9994 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group...

09-16A32-IgA-Biotin.xls

ENV1 (31) File Name: 09-16A32-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 14-Jul-2011, 01:08 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 09-16A32 Signed By: Josh Eckels Document ID: 9910 RP1 PMT (Volts): 738.95 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...

06-15A12-IgA-Biotin.xls

ENV1 (31) File Name: 06-15A12-IgA-Biotin.srbx Analyte: ENV1 (31) Acquisition Date: 24-Jun-2011, 02:10 PM Reader Serial Number: LX10007031402 Standard Lot: Standard1 Expiration Date: <none> Plate ID: 06-15A12 Signed By: Cory Nathe Document ID: 9999 RP1 PMT (Volts): 738.22 RP1 Target: 16357 Analyte Type Well Description FI FI - Bkgd Std Dev %CV Obs Conc Exp Conc (Obs/Exp) * 100 Group Ratio...