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Annotated Study
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dataset5010.tsv

ParticipantId date QCStateLabel RowId M1 M2 M3 File Run.InstrumentSetting Run.Batch.OperatorEmail Run.Batch.Instrument Run.Batch.Instrument.Instrument ID Run.Name Run.Comments 249318596 2008-06-30 00:00:00.0 7 520 1850 16.0 24 john.doe ABI-QSTAR Run2 249318596 2008-06-30 00:00:00.0 1 543 1830 14.5 24 john.doe ABI-QSTAR Run1 249318596 2008-09-02 00:00:00.0 8 420 1770 12.2 24 john.doe ABI-QSTAR...

SimpleSpecimenRepository.xls

SimpleSpecimens specimen_number Vial Id ptid Date Volume Units Specimen Type additive derivative_type Sub Additive Derivative visit_value 526515315.6 526515315.6304.370 249318596 5/17/08 1.0 ML Blood (Whole) Serum Separator Serum N/A 2404 526515315.6 526515315.6304.371 249318596 5/17/08 1.0 ML Blood (Whole) Serum Separator Serum N/A 2404 526515315.6 526515315.6304.372 249318596 5/17/08 1.0 ML...

GenericAssay_Run2.xls

Sheet1 participantid Date M1 M2 M3 249318596 6/30/08 520 1850 16 249318596 9/2/08 420 1770 12.2 249318596 11/23/08 185 1600 15.5 249320107 7/30/08 344 1550 13.2 249320107 9/17/08 342 1450 12.9 249320127 7/30/08 1116 2000 13.5 249320127 9/17/08 987 2000 19.3 249320127 2/8/09 1009 2100 17.3 249320127 3/12/09 1200 2200 15.4 249320489 9/26/08 435 1450 13.3 249320489 12/3/08 234 1300 16.4 ...

GenericAssay_Run2.xls

Sheet1 participantid Date M1 M2 M3 249318596 6/30/08 520 1850 16 249318596 9/2/08 420 1770 12.2 249318596 11/23/08 185 1600 15.5 249320107 7/30/08 344 1550 13.2 249320107 9/17/08 342 1450 12.9 249320127 7/30/08 1116 2000 13.5 249320127 9/17/08 987 2000 19.3 249320127 2/8/09 1009 2100 17.3 249320127 3/12/09 1200 2200 15.4 249320489 9/26/08 435 1450 13.3 249320489 12/3/08 234 1300 16.4 ...

GenericAssay_Run2.xls

Sheet1 participantid Date M1 M2 M3 249318596 6/30/08 520 1850 16 249318596 9/2/08 420 1770 12.2 249318596 11/23/08 185 1600 15.5 249320107 7/30/08 344 1550 13.2 249320107 9/17/08 342 1450 12.9 249320127 7/30/08 1116 2000 13.5 249320127 9/17/08 987 2000 19.3 249320127 2/8/09 1009 2100 17.3 249320127 3/12/09 1200 2200 15.4 249320489 9/26/08 435 1450 13.3 249320489 12/3/08 234 1300 16.4 ...

dataset5012.tsv

ParticipantId date QCStateLabel ObjectId ObjectUri SpecimenLsid SpecimenLsid.LSID NormalizedSpotCount SpotCount WellgroupName WellgroupLocation AntigenID AntigenName CellWell SpecimenLsid.Property.SpecimenID SpecimenLsid.Property.SampleDescription SpecimenLsid.Property.VisitID Run.ProtocolName Run.LabID Run.PlateID Run.TemplateID Run.ExperimentDate Run.PlateReader Run.PlateReader.Value Run.SubtractBackground...

GenericAssay_BadData.xls

Sheet1 participantid Date M1 M2 M3 249318596 1/18/09 261 1300 4.8 249320107 1/6/09 223 1400 37 249320127 1/6/09 897 2200 21 249320489 1/15/09 175 1200 13.3 249320897 1/3/09 1200 1890 20 Sheet2 Sheet3

Consent.xls

data participantid SequenceNum Date ParticipationConsent GeneticConsent 249318596 2404 5/17/08 249320107 2404 6/4/08 249320127 2404 7/30/08 249320489 2404 7/30/08 249320897 2404 5/1/08 249325717 2404 4/27/08 &L&D&Cdata&RPage &P/&N

GenericAssay_BadData.xls

Sheet1 participantid Date M1 M2 M3 249318596 1/18/09 261 1300 4.8 249320107 1/6/09 223 1400 37 249320127 1/6/09 897 2200 21 249320489 1/15/09 175 1200 13.3 249320897 1/3/09 1200 1890 20 Sheet2 Sheet3

Specimen Barcodes.pdf

Subject 249318596 Date collected 5/10/2009 Specimen Subject 249320107 Date collected 4/6/2009 Specimen Subject 249320127 Date collected 9/13/2009 Specimen Subject 249320489 Date collected 8/10/2009 Specimen Subject 249320897 Date collected 3/27/2009 Specimen Subject 249325717 Date collected 3/5/2009 Specimen

dataset5017.tsv

ParticipantId date QCStateLabel ParticipationConsent GeneticConsent 249318596 2008-05-17 00:00:00.0 true true 249320107 2008-06-04 00:00:00.0 true false 249320127 2008-07-30 00:00:00.0 true true 249320489 2008-07-30 00:00:00.0 true true 249320897 2008-05-01 00:00:00.0 true true 249325717 2008-04-27 00:00:00.0 false false

dataset5017.tsv

ParticipantId date QCStateLabel ParticipationConsent GeneticConsent 249318596 2008-05-17 00:00:00.0 true true 249320107 2008-06-04 00:00:00.0 true false 249320127 2008-07-30 00:00:00.0 true true 249320489 2008-07-30 00:00:00.0 true true 249320897 2008-05-01 00:00:00.0 true true 249325717 2008-04-27 00:00:00.0 false false

participant_groups.xml

154864 278261 246655 831874 160386 428313 799183 875833 485071 747759 165074 894045 743020 151224 468193 172476 103866 548300 931680 303553 387549 537893 234482 952513 596107 133428 967527...

participant_groups.xml

103866 110349 120043 121933 125478 133428 144740 150489 155805 174815 175603 185014 209005 211137 213932 219304 237773 249318596 249325717 266626 278889 293749 296663 298529 303553 309880 338626...

specimens.tsv

# specimens record_id record_source global_unique_specimen_id lab_id unique_specimen_id ptid parent_specimen_id draw_timestamp sal_receipt_date specimen_number class_id visit_value protocol_number visit_description other_specimen_id volume volume_units stored storage_flag storage_date ship_flag ship_batch_number ship_date imported_batch_number lab_receipt_date...

Interactive.specimens

%/ةد�ذدز # labs lab_id ldms_lab_code labware_lab_code lab_name lab_upload_code is_sal is_repository is_clinic is_endpoint street_address city governing_district country postal_area description 5 435 Mont Montlake University 0 1 0 0 10 460 Hptc High Point Clinic 0 0 1 0 19 350 Delb Delridge Biomedical 0 0 0 1 20 510 Rain Rainier Lab Storage 0 1 0 0 21 515 Alki Alki University...

LabKey.specimens

%/ةد�ذدز # labs lab_id ldms_lab_code labware_lab_code lab_name lab_upload_code is_sal is_repository is_clinic is_endpoint street_address city govering_district country postal_area description 5 435 Mont Montlake University 1 10 460 Hptc High Point Clinic 1 19 350 Delb Delridge Biomedical 1 20 510 Rain Rainier Lab Storage 1 21 515 Alki Alki University 1 ...

Advanced_Archive.specimens

advanced_repository_zip/additives.tsv # additives additive_id ldms_additive_code labware_additive_code additive 8 REDTOP 9 PLAINRED 12 LST_HEP 13 LST_CIT 1 ACD ACD Acid Citrate Dextrose 14 ORA Orasure Collection Container 15 AHP Ammonium Heparin 16 PAC Port-a-cul Transport Tube 17 CPD Citrate Phosphate Dextrose 18 PAX PAXgene Blood RNA tube 19 CPH Cell Preparation Tube Heparin 20 PBS...

Weight by Time.db_64.report.xml

Reports - Deprecated true timeChartReportDescriptor Weight by Time 10.39 ReportService.TimeChartReport {"chartLayout":"single","chartSubjectSelection":"subjects","displayIndividual":true,"displayAggregate":false,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Physical Exam","measures":[{"measure":{"id":34,"name":"Weight_kg","label":"Weight...

CD4+ Levels Per Participant.report.xml

Reports CD4+ Levels Per Participant false timeChartReportDescriptor 14.1 ReportService.TimeChartReport CD4+ Levels Per Participant {"chartLayout":"single","chartSubjectSelection":"subjects","displayIndividual":true,"displayAggregate":false,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"CD4+ Levels...