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dataset5017.tsv

ParticipantId date QCStateLabel ParticipationConsent GeneticConsent 249318596 2008-05-17 00:00:00.0 true true 249320107 2008-06-04 00:00:00.0 true false 249320127 2008-07-30 00:00:00.0 true true 249320489 2008-07-30 00:00:00.0 true true 249320897 2008-05-01 00:00:00.0 true true 249325717 2008-04-27 00:00:00.0 false false

participant_groups.xml

154864 278261 246655 831874 160386 428313 799183 875833 485071 747759 165074 894045 743020 151224 468193 172476 103866 548300 931680 303553 387549 537893 234482 952513 596107 133428 967527...

participant_groups.xml

103866 110349 120043 121933 125478 133428 144740 150489 155805 174815 175603 185014 209005 211137 213932 219304 237773 249318596 249325717 266626 278889 293749 296663 298529 303553 309880 338626...

Problem with participant reports

(copied from email) A while ago (maybe older version 10.something), I used to generate participant chart using R as following instructions below. https://www.labkey.org/wiki/home/Documentation/page.view?name=participantLattice&_docid=wiki%3A1d6135fe-4f82-102a-b2cd-d104f9cd70ed And I could see the “next participant” tab in the view so that I could navigate through each participant.   But in...

Weight by Time.db_64.report.xml

Reports - Deprecated true timeChartReportDescriptor Weight by Time 10.39 ReportService.TimeChartReport {"chartLayout":"single","chartSubjectSelection":"subjects","displayIndividual":true,"displayAggregate":false,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Physical Exam","measures":[{"measure":{"id":34,"name":"Weight_kg","label":"Weight...

CD4+ Levels Per Participant.report.xml

Reports CD4+ Levels Per Participant false timeChartReportDescriptor 14.1 ReportService.TimeChartReport CD4+ Levels Per Participant {"chartLayout":"single","chartSubjectSelection":"subjects","displayIndividual":true,"displayAggregate":false,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"CD4+ Levels...

Weight by Time.report.xml

Reports - Deprecated Weight by Time true timeChartReportDescriptor 10.39 ReportService.TimeChartReport Weight by Time {"chartLayout":"single","chartSubjectSelection":"subjects","displayIndividual":true,"displayAggregate":false,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Physical Exam","measures":[{"measure":{"id":34,"name":"Weight_kg","label":"Weight...

Viral Load per Participant.db_61.report.xml

Reports - Deprecated true timeChartReportDescriptor Viral Load per Participant 12.2 ReportService.TimeChartReport {"chartLayout":"per_subject","chartSubjectSelection":"subjects","displayIndividual":true,"displayAggregate":false,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"HIV Test Results","measures":[{"measure":{"id":41,"name":"HIVLoadQuant","label":"Viral...

Viral Load per Participant.report.xml

Reports - Deprecated Viral Load per Participant true timeChartReportDescriptor 12.2 ReportService.TimeChartReport Viral Load per Participant {"chartLayout":"per_subject","chartSubjectSelection":"subjects","displayIndividual":true,"displayAggregate":false,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"HIV...

Lab Results - Mean CD4+ Count.db_40.report.xml

false timeChartReportDescriptor Lab Results - Mean CD4+ Count 13.3 ReportService.TimeChartReport {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Lab Results - Mean CD4+ Count","measures":[{"measure":{"id":63,"name":"CD4","label":"CD4+...

Average CD4+ Levels Per Cohort.db_33.report.xml

Reports false timeChartReportDescriptor Average CD4+ Levels Per Cohort 12.1 ReportService.TimeChartReport {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Average CD4+ Levels Per Cohort","measures":[{"measure":{"id":18,"name":"CD4","label":"CD4+...

Mean Lymphocyte Levels Per Treatment Group.report.xml

Reports Mean Lymphocyte Levels Per Treatment Group false timeChartReportDescriptor 13.3 ReportService.TimeChartReport Mean Lymphocyte Levels Per Treatment Group {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":2,"hideDataPoints":false,"pointClickFn":null,"title":"Lab...

Mean CD4+ Levels Per Treatment Group.report.xml

Reports Mean CD4+ Levels Per Treatment Group false timeChartReportDescriptor 13.3 ReportService.TimeChartReport Mean CD4+ Levels Per Treatment Group {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Average...

cohorts.xml

101344 103505 103866 107201 119180 120043 121933 125478 133428 140163 150489 150817 151224 154864 155805 160386 165074 166726 167572 172476 174815 175603 185014 186899 191927 209005 211137 213932 220376 226423 234482 237773 246655...

Lymphocyte Count_ Disease Progression without ARV.db_41.report.xml

Reports false timeChartReportDescriptor Lymphocyte Count: Disease Progression without ARV 12.2 ReportService.TimeChartReport {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Lab Results","measures":[{"measure":{"id":48,"name":"Lymphocytes","label":"Lymphs...

welcome.wiki

This page helps you explore LabKey Server's support for observational studies. You can: - View Study data {link:**by participant**|/Study/home/Study/demo/participant.view?datasetId=5007&participantId=249318596}. - Explore data visualization techniques by clicking on the Views ({link:**charts**|https://www.labkey.org/study/home/Study/demo/dataset.view?Dataset.reportId=db%3A257&datasetId=5007} , {link:**R...

dataset5013.tsv

ParticipantId date QCStateLabel RowId ObjectUri SpecimenLsid SpecimenLsid.LSID FitError WellGroupName AUC_Poly PositiveAUC_Poly AUC_4pl PositiveAUC_4pl AUC_5pl PositiveAUC_5pl SpecimenLsid.Property.SpecimenID SpecimenLsid.Property.VisitID SpecimenLsid.Property.SampleDescription SpecimenLsid.Property.InitialDilution SpecimenLsid.Property.Factor SpecimenLsid.Property.Method Cutoff50.Point Cutoff80.Point...

ClinCapture & Laboratory equipment integration for study

Hello, In the midst of integrating ClinCapture with Labkey for an upcoming clinical study. Currently we are performing test where we export normalized CRF data from ClinCapture (either in xls or other format) and then import into Labkey. We have split demographic and medical history information into two separate Labkey datasets (clinical demographic fields --> labkey demographic dataset due...

HIV Disease Progression - Demo Study-Lab Results-2019-04-11-09492.tsv

ParticipantId sourcelsid date Day DataSets/Demographics/Gender oldcd4 Lymphocytes Hemoglobin DataSets/Demographics/Group DataSets/Demographics/TreatmentGroup CD4 119180 4/20/2008 0 f 239 1802 17 Group 1: Acute HIV-1 No ARV 120 119180 5/18/2008 28 f 266 1787 18 Group 1: Acute HIV-1 No ARV 133 119180 6/15/2008 56 f 224 1843 19 Group 1: Acute HIV-1 No ARV 112 119180 7/13/2008 84 f 163 1780 17 Group...

HIV Disease Progression - Demo Study-Lab Results-2019-04-11-0949.tsv

ParticipantId sourcelsid date Day DataSets/Demographics/Gender oldcd4 Lymphocytes Hemoglobin DataSets/Demographics/Group DataSets/Demographics/TreatmentGroup CD4 119180 4/20/2008 0 f 239 1802 17 Group 1: Acute HIV-1 No ARV 120 119180 5/18/2008 28 f 266 1787 18 Group 1: Acute HIV-1 No ARV 133 119180 6/15/2008 56 f 224 1843 19 Group 1: Acute HIV-1 No ARV 112 119180 7/13/2008 84 f 163 1780 17 Group...