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Annotated Study
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Study Annotated Study -- Participant 103866

Study Data Grid Tour -- Participant 103866

Study HIV Disease Progression - Demo Study -- Participant 103866

How to create "New Study with pre-defined timepoints"

https://www.labkey.org/wiki/home/Documentation/page.view?name=setUpDatasets I am trying to set up a new "Study" and am having some issues as below, can someone help please? For the "Demographics" file instead of having a start date I have predefined time points so instead of the following: 101344    2008-04-27    2008-04-27    Germany    English    f    ARV    Group 1: Acute HIV-1       ...

participant_groups.xml

103866 110349 120043 121933 125478 133428 144740 150489 155805 174815 175603 185014 209005 211137 213932 219304 237773 249318596 249325717 266626 278889 293749 296663 298529 303553 309880 338626...

participant_groups.xml

154864 278261 246655 831874 160386 428313 799183 875833 485071 747759 165074 894045 743020 151224 468193 172476 103866 548300 931680 303553 387549 537893 234482 952513 596107 133428 967527...

cohorts.xml

101344 103505 103866 107201 119180 120043 121933 125478 133428 140163 150489 150817 151224 154864 155805 160386 165074 166726 167572 172476 174815 175603 185014 186899 191927 209005 211137 213932 220376 226423 234482 237773 246655...

Cd4 vs Viral Load.db_35.report.xml

false timeChartReportDescriptor Cd4 vs Viral Load 12.31 ReportService.TimeChartReport {"chartLayout":"per_subject","chartSubjectSelection":"subjects","displayIndividual":true,"displayAggregate":false,"aggregateType":"Mean","errorBars":"None","lineWidth":2,"hideDataPoints":true,"pointClickFn":null,"title":"Lab Results, HIV Test Results","measures":[{"measure":{"id":4,"name":"CD4","label":"CD4+...

Mean Lymphocyte Levels Per Treatment Group.report.xml

Reports Mean Lymphocyte Levels Per Treatment Group false timeChartReportDescriptor 13.3 ReportService.TimeChartReport Mean Lymphocyte Levels Per Treatment Group {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":2,"hideDataPoints":false,"pointClickFn":null,"title":"Lab...

Mean CD4+ Levels Per Treatment Group.report.xml

Reports Mean CD4+ Levels Per Treatment Group false timeChartReportDescriptor 13.3 ReportService.TimeChartReport Mean CD4+ Levels Per Treatment Group {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Average...

Mean Cohort Lymph Levels.db_43.report.xml

Reports false timeChartReportDescriptor Mean Cohort Lymph Levels 11.22 ReportService.TimeChartReport {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":2,"hideDataPoints":false,"pointClickFn":null,"title":"Lab Results","measures":[{"measure":{"id":31,"name":"Lymphocytes","label":"Lymphs...

Lab Results - Mean CD4+ Count.db_40.report.xml

false timeChartReportDescriptor Lab Results - Mean CD4+ Count 13.3 ReportService.TimeChartReport {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Lab Results - Mean CD4+ Count","measures":[{"measure":{"id":63,"name":"CD4","label":"CD4+...

Average CD4+ Levels Per Cohort.db_33.report.xml

Reports false timeChartReportDescriptor Average CD4+ Levels Per Cohort 12.1 ReportService.TimeChartReport {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Average CD4+ Levels Per Cohort","measures":[{"measure":{"id":18,"name":"CD4","label":"CD4+...

Lymphocyte Count_ Disease Progression without ARV.db_41.report.xml

Reports false timeChartReportDescriptor Lymphocyte Count: Disease Progression without ARV 12.2 ReportService.TimeChartReport {"chartLayout":"single","chartSubjectSelection":"groups","displayIndividual":false,"displayAggregate":true,"aggregateType":"Mean","errorBars":"None","lineWidth":3,"hideDataPoints":false,"pointClickFn":null,"title":"Lab Results","measures":[{"measure":{"id":48,"name":"Lymphocytes","label":"Lymphs...

How is Study Data Stored in LabKey Server?

This topic answers a few questions about how study data is stored inside the server: When you create a study dataset and import data to it, how is that data stored and managed in the system? How is data from different studies related? Is the data from different studies physically or logically separated? Topics Data Tables within Schema Import Process System Tables Visit Labels Data Integration...

dataset5006.tsv

ParticipantId date QCStateLabel HIVWestern HIVStdAntibody HIVLoadIneq HIVLoadQuant HIVLoadQual HIVRapidTest HIVSourceLab 103866 2008-04-30 00:00:00.0 0 103866 2008-05-28 00:00:00.0 183255 103866 2008-06-25 00:00:00.0 38618 103866 2008-07-23 00:00:00.0 7774 103866 2008-08-20 00:00:00.0 3125 103866 2008-09-17 00:00:00.0 2489 103866 2008-11-12 00:00:00.0 ...

dataset5006.tsv

ParticipantId date QCStateLabel HIVWestern HIVStdAntibody HIVLoadIneq HIVLoadQuant HIVLoadQual HIVRapidTest HIVSourceLab 103866 2008-04-30 00:00:00.0 0 103866 2008-05-28 00:00:00.0 183255 103866 2008-06-25 00:00:00.0 38618 103866 2008-07-23 00:00:00.0 7774 103866 2008-08-20 00:00:00.0 3125 103866 2008-09-17 00:00:00.0 2489 103866 2008-11-12 00:00:00.0 ...

dataset5007.tsv

ParticipantId date QCStateLabel CD4 Lymphocytes Hemoglobin ViralLoad 101344 2008-04-30 00:00:00.0 811 1491 14.0 101344 2008-05-28 00:00:00.0 794 1446 13.0 101344 2008-06-25 00:00:00.0 653 1560 12.0 101344 2008-07-23 00:00:00.0 1176 1486 11.0 101344 2008-08-20 00:00:00.0 1292 1343 11.0 101344 2008-09-17 00:00:00.0 1210 1186 12.0 101344 2008-10-15 00:00:00.0 1158 1320 13.0 101344 2008-11-12...

Physical Exam.xls

data Participant ID Date Height (cm) Weight (kg) Temperature (C) Systolic Blood Pressure xxx/ Diastolic Blood Pressure /xxx Pulse Respirations Clinician Signature/Date Pregnancy Form Language ARV? ARV Regimen Type 101344 2008-04-27 173.0000 68 37.0 117 83 61 101344 2008-05-25 175.0000 69 36.8 145 103 71 101344 2008-06-22 175.0000 71 38.2 166 101 68 101344 2008-08-17 173.0000 73 36.5 125 95 74...

HIV Disease Progression - Demo Study-Lab Results-2019-04-11-0952.tsv

ParticipantId date QCStateLabel CD4 Lymphocytes Hemoglobin ViralLoad 101344 2008-04-30 00:00:00.0 811 1491 14.0 101344 2008-05-28 00:00:00.0 794 1446 13.0 101344 2008-06-25 00:00:00.0 653 1560 12.0 101344 2008-07-23 00:00:00.0 1176 1486 11.0 101344 2008-08-20 00:00:00.0 Not Yet Reviewed 1292 1343 11.0 10000 101344 2008-09-17 00:00:00.0 1210 1186 12.0 101344 2008-10-15 00:00:00.0 1158 1320...