Participant - 249318596: /home/Demos/Study/Annotated Study

Participant - 249318596

Annotated Study

5008: Demographics ?
Start Date	2008-05-17
Country	USA
Primary Language
Gender	m
Treatment Group	No ARV
Cohort
Status of Infection	confirmed
Comments
Height	72

		Baseline	Month 2	Month 3	Month 4	Month 7	Month 9	Month 10		Month 11	Month 12	Month 13
		2008-05-17	2008-06-30	2008-08-04	2008-09-02	2008-11-23	2009-01-18	2009-02-17	2009-03-16	2009-04-17	2009-05-16	2009-06-15
5004: Physical Exam ?	10	1		1	1	1	1	1	1	1	1	1
QC State		Not Yet Reviewed?		Not Yet Reviewed?	Not Yet Reviewed?	Not Yet Reviewed?	Not Yet Reviewed?	Not Yet Reviewed?	Not Yet Reviewed?	Not Yet Reviewed?	Not Yet Reviewed?	Not Yet Reviewed?
Date		2008-05-17		2008-08-04	2008-09-02	2008-11-23	2009-01-18	2009-02-17	2009-03-16	2009-04-17	2009-05-16	2009-06-15
Height (cm)		184.4		184.7	183.4	185.3	184.8	185.2	183.0	184.5	185.2	184.6
Weight (kg)		86		84	83	80	79	79	79	78	77	75
Temperature (C)		36.0		37.0	37.0	36.7	36.8	37.3	38.0	40.0	39.0	39.0
Systolic Blood Pressure		129		133	133	135	142	129	122	122	121	123
Diastolic Blood Pressure		76		79	85	85	90	87	80	76	78	76
Pulse		64		67	68	70	75	79	64	63	65	64
Respirations		24		23	17	23	18	21	19	21	19	18
Clinician Signature/Date		1		1	1	1	1	1	1	0	1	1
Pregnancy		false		false	false	false	false	false	false	false	false	false
Form Language		English		English	English	English	English	English	English	English	English	English
ARV?		false		false	false	false	false	false	false	false	false	false
ARV Regimen Type

5017: Participation and Genetic Consent ?	1	1
QC State		Unspecified
Date		2008-05-17
Participation Consent		true
Genetic Consent		true
DSRowId		1
Di Import Hash
Day		0
Dataset Id		5017

5006: HIV Test Results ?	10	1		1	1	1	1	1	1	1	1	1
QC State		Unspecified		Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified
Date		2008-05-17		2008-08-04	2008-09-02	2008-11-23	2009-01-18	2009-02-17	2009-03-16	2009-04-17	2009-05-16	2009-06-15
Day		0		79	108	190	246	276	303	335	364	394
HIV Western Blot		Positive			Positive	Positive	Positive	Positive	Positive	Positive	Positive	Positive
Standard HIV Antibody		Positive		Positive	Positive	Positive	Positive	Positive	Positive	Positive	Positive	Positive
Viral Load > = <		Equals		Equals	Equals	Equals	Equals	Equals	Equals	Equals	Equals	Equals
Viral Load Quantified (copies/ml)		4345		3452	98354	32453	324234	345452	235671	456674	567432	653465
Viral Load Qualitative Result		Positive		Positive	Positive	Positive	Positive	Positive	Positive	Positive	Positive	Positive
HIV Rapid Blood Test		Positive		Positive	Positive	Positive	Positive	Positive	Positive	Positive	Positive	Positive
Source of HIV Tests		Olympia University Consortium		Olympia University Consortium	Olympia University Consortium	Olympia University Consortium	Olympia University Consortium	Olympia University Consortium	Olympia University Consortium	Olympia University Consortium	Olympia University Consortium	Olympia University Consortium

5007: Lab Results ?	10	1		1	1	1	1	1	1	1	1	1
QC State		Unspecified		Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified
Date		2008-05-17		2008-08-04	2008-09-02	2008-11-23	2009-01-18	2009-02-17	2009-03-16	2009-04-17	2009-05-16	2009-06-15
Day		0		79	108	190	246	276	303	335	364	394
CD4+ (cells/mm3)		543		520	420	185	261	308	177	144	167	154
Lymphs (cells/mm3)		1830		1850	1770	1600	1300	1200	1300	1350	1300	1200
Hemoglobin		14.5		16.0	12.2	15.5	13.9	13.7	12.9	11.1	13.2	16.1
Viral Load

5009: Status Assessment ?	10	1		1	1	1	1	1	1	1	1	1
QC State		Unspecified		Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified	Unspecified
Date		2008-05-17		2008-08-04	2008-09-02	2008-11-23	2009-01-18	2009-02-17	2009-03-16	2009-04-17	2009-05-16	2009-06-15
Day		0		79	108	190	246	276	303	335	364	394
Meets Criteria for Acute		true		true	true	true	true	true	true	true	true	true
Agrees to Acute Schedule		true		true	true	true	true	true	true	true	true	true
Agrees to Provide Partner Info		true		true	true	true	true	true	true	true	true	true
Partner #1 ID		249320489		249320489	249320489	249320489	249320489	249320489	249320489	249320489	249320489	249320489
Partner #2 ID
Cohort		1		1	1	1	1	1	1	1	1	1

5018: Luminex Assay 100 ?	26	1	1		1	1	1		1
QC State		Unspecified	Unspecified		Unspecified	Unspecified	Unspecified		Unspecified
Date		2008-05-17	2008-06-30		2008-09-02	2008-11-23	2009-01-18		2009-03-16
Data		40564	40564		40564	40564	40564		40564
Name		02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls		02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls		02-14A22-IgA-Biotin.xls
Name		Luminex Assay 100	Luminex Assay 100		Luminex Assay 100	Luminex Assay 100	Luminex Assay 100		Luminex Assay 100
Well Role		Unknown	Unknown		Unknown	Unknown	Unknown		Unknown
Type		X7	X13		X16	X20	X27		X36
Well		A7	D1		C4	C8	E3		F12
Outlier		0	0		0	0	0		0
Description		117	123		126	130	137		146
Specimen ID		117	123		126	130	137		146
Extra Specimen Info
FI String		20	14		35	58	17		50
FI		20.0	14.0		35.0	58.0	17.0		50.0
FI Number		20.0	14.0		35.0	58.0	17.0		50.0
FI-Bkgd String		5	2.75		20	43	2		35
FI-Bkgd		5.0	2.75		20.0	43.0	2.0		35.0
FI-Bkgd Number		5.0	2.75		20.0	43.0	2.0		35.0
Std Dev String
Std Dev		0.70710677	0.70710677		0.35355338	0.0	1.4142135		3.1819806
Std Dev Number		0.70710677	0.70710677		0.35355338	0.0	1.4142135		3.1819806
Obs Conc String		1.74389	0.73507		5.24426	9.8457	0.90228		8.30509
Obs Conc BioPlex 5PL		1.74389	0.73507		5.24426	9.8457	0.90228		8.30509
Obs Conc Number		1.74389	0.73507		5.24426	9.8457	0.90228		8.30509
Exp Conc
(Obs/Exp)*100 BioPlex 5PL
Conc In Range
Conc In Range Number
Conc In Range String
Dilution		200.0	200.0		200.0	200.0	200.0		200.0
Group
Ratio
Sampling Errors
Bead Count		231	131		215	223	205		231
CV		0.036261886	0.048765983		0.010174198	0.0	0.07856742		0.066638336
Summary		false	false		false	false	false		false
Titration
Name
Analyte
Name
Analyte		113	114		113	113	113		113
Name		ENV1 (31)	ENV2 (41)		ENV1 (31)	ENV1 (31)	ENV1 (31)		ENV1 (31)
Visit ID
Isotype
Conjugate
Test Date
Replaces Previous File		false	false		false	false	false		false
Date file was modified
Specimen Type
Additive
Derivative
File Name		02-14A22-IgA-Biotin.srbx	02-14A22-IgA-Biotin.srbx		02-14A22-IgA-Biotin.srbx	02-14A22-IgA-Biotin.srbx	02-14A22-IgA-Biotin.srbx		02-14A22-IgA-Biotin.srbx
Acquisition Date		2011-06-21	2011-06-21		2011-06-21	2011-06-21	2011-06-21		2011-06-21
Reader Serial Number		LX10011084403	LX10011084403		LX10011084403	LX10011084403	LX10011084403		LX10011084403
Plate ID		02-14A22	02-14A22		02-14A22	02-14A22	02-14A22		02-14A22
RP1 PMT (Volts)		687.42	687.42		687.42	687.42	687.42		687.42
RP1 Target		16357	16357		16357	16357	16357		16357
Participant Visit Resolver		Lookup	Lookup		Lookup	Lookup	Lookup		Lookup
Species		Human	Human		Human	Human	Human		Human
Lab ID		LabKey	LabKey		LabKey	LabKey	LabKey		LabKey
Analysis Software		Bioplex	Bioplex		Bioplex	Bioplex	Bioplex		Bioplex
Assay Id		02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls		02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls	02-14A22-IgA-Biotin.xls		02-14A22-IgA-Biotin.xls
Comments
DSRowId		4	8		10	12	14		26
Di Import Hash
Row Id		9017	9126		9035	9043	9057		9076
Protocol		1221	1221		1221	1221	1221		1221
FI OOR Indicator
FI-Bkgd OOR Indicator
Std Dev OOR Indicator
Obs Conc BioPlex 5PL OOR Indicator
Conc In Range OOR Indicator
Analyte Titration		113	114		113	113	113		113
Single Point Control
Analyte Single Point Control		113	114		113	113	113		113
Day		0	44		108	190	246		303
Dataset Id		5018	5018		5018	5018	5018		5018

5010: GenericAssay ?	5		1		1	1	1
QC State			Unspecified		Unspecified	Unspecified	Unspecified
Date			2008-06-30		2008-09-02	2008-11-23	2009-01-18
M1			543		420	185	261
M2			1830		1770	1600	1300
M3			14.5		12.2	15.5	5.0
File
Instrument Setting			24		24	24	24
Operator Email			john.doe		john.doe	john.doe	john@labkey.com
Instrument			ABI-QSTAR		ABI-QSTAR	ABI-QSTAR	ABI-QSTAR
Instrument ID
Assay Id			Run1		Run2	Run2	Run3
Comments
DSRowId			2		3	4	5
Di Import Hash
RowId			1		8	9	26
Day			44		108	190	246
Dataset Id			5010		5010	5010	5010

5012: ELISpotAssay ?	24				1
QC State					Unspecified
Date					2008-09-02
Day					108
Antigen ID					7
Antigen Name					TT
Cell Well					40000
Spot Count					727.0
Wellgroup Location					(0, 11)
Wellgroup Name					Specimen 1

5013: NAbAssay ?	1				1
QC State					Unspecified
Date					2008-09-02
LSID					urn:lsid:cpas.fhcrc.org:Sample.656.NAbAssay:OBJECT-Specimen+1-1252015588751
Fit Error					4.6768026
Wellgroup Name					Specimen 1
AUC Poly					0.22286531
Positive AUC Poly					0.230439
AUC 4pl					0.20997502
Positive AUC 4pl					0.22581153
AUC 5pl					0.2238286
Positive AUC 5pl					0.23785216
Specimen ID					526455390.2504.346
Visit ID					2804.0
Sample Description
Initial Dilution					20.0
Dilution Factor					3.0
Method					Dilution
Point IC50					102.71205
Point IC80					25.865227
Cutoff Percentage (1)					50
Cutoff Percentage (2)					80
Cutoff Percentage (3)
Virus Name					HIV-1
Virus ID					P392
Host Cell					T
Study Name					Demo
Experiment Performer					Elizabeth
Experiment ID					Nab32
Incubation Time					30
Plate Number					1
Experiment Date
File ID					NAbresults2
Lock Graph Y-Axis					false
Curve Fit Method					Five Parameter
Assay Id					NAb1
Comments
DSRowId					1
Di Import Hash
ObjectId					36
Object Uri					urn:lsid:cpas.fhcrc.org:AssayRunNabDataRow.Folder-656:7a8520ae-7af4-102c-ba3f-d104f9cd649f-Specimen+1
Specimen					urn:lsid:cpas.fhcrc.org:Sample.656.NAbAssay:OBJECT-Specimen+1-1252015588751
Day					108
Dataset Id					5013

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LabKey Support

Participant - 249318596