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Annotated Study
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Study Annotated Study -- Participant 249318596

Study Data Grid Tour -- Participant 249318596

Study HIV Disease Progression - Demo Study -- Participant 249318596

Status Assessment.xls

data Participant ID Source Lsid Date Day Meets Criteria for Acute Agrees to Acute Schedule Agrees to Provide Partner Info Partner #1 ID Partner #2 ID Cohort 249318596 2008-08-04 79 true true true 249320489 1 249318596 2008-11-23 190 true true true 249320489 1 249318596 2008-09-02 108 true true true 249320489 1 249318596 2009-04-17 335 true true true 249320489 1 249318596 2009-01-18...

dataset5009.tsv

ParticipantId date QCStateLabel MeetsCriteria AgreesToAccuteSchedule PartnerAgrees Partner1 Partner2 Cohort 249318596 2008-05-17 00:00:00.0 true true true 249320489 1 249318596 2008-08-04 00:00:00.0 true true true 249320489 1 249318596 2008-09-02 00:00:00.0 true true true 249320489 1 249318596 2008-11-23 00:00:00.0 true true true 249320489 1 249318596 2009-01-18 00:00:00.0 true true true...

dataset5009.tsv

ParticipantId date QCStateLabel MeetsCriteria AgreesToAccuteSchedule PartnerAgrees Partner1 Partner2 Cohort 249318596 2008-05-17 00:00:00.0 true true true 249320489 1 249318596 2008-08-04 00:00:00.0 true true true 249320489 1 249318596 2008-09-02 00:00:00.0 true true true 249320489 1 249318596 2008-11-23 00:00:00.0 true true true 249320489 1 249318596 2009-01-18 00:00:00.0 true true true...

SimpleSpecimenRepository.xls

SimpleSpecimens specimen_number Vial Id ptid Date Volume Units Specimen Type additive derivative_type Sub Additive Derivative visit_value 526515315.6 526515315.6304.370 249318596 5/17/08 1.0 ML Blood (Whole) Serum Separator Serum N/A 2404 526515315.6 526515315.6304.371 249318596 5/17/08 1.0 ML Blood (Whole) Serum Separator Serum N/A 2404 526515315.6 526515315.6304.372 249318596 5/17/08 1.0 ML...

GenericAssay_Run2.xls

Sheet1 participantid Date M1 M2 M3 249318596 6/30/08 520 1850 16 249318596 9/2/08 420 1770 12.2 249318596 11/23/08 185 1600 15.5 249320107 7/30/08 344 1550 13.2 249320107 9/17/08 342 1450 12.9 249320127 7/30/08 1116 2000 13.5 249320127 9/17/08 987 2000 19.3 249320127 2/8/09 1009 2100 17.3 249320127 3/12/09 1200 2200 15.4 249320489 9/26/08 435 1450 13.3 249320489 12/3/08 234 1300 16.4 ...

GenericAssay_Run2.xls

Sheet1 participantid Date M1 M2 M3 249318596 6/30/08 520 1850 16 249318596 9/2/08 420 1770 12.2 249318596 11/23/08 185 1600 15.5 249320107 7/30/08 344 1550 13.2 249320107 9/17/08 342 1450 12.9 249320127 7/30/08 1116 2000 13.5 249320127 9/17/08 987 2000 19.3 249320127 2/8/09 1009 2100 17.3 249320127 3/12/09 1200 2200 15.4 249320489 9/26/08 435 1450 13.3 249320489 12/3/08 234 1300 16.4 ...

GenericAssay_Run2.xls

Sheet1 participantid Date M1 M2 M3 249318596 6/30/08 520 1850 16 249318596 9/2/08 420 1770 12.2 249318596 11/23/08 185 1600 15.5 249320107 7/30/08 344 1550 13.2 249320107 9/17/08 342 1450 12.9 249320127 7/30/08 1116 2000 13.5 249320127 9/17/08 987 2000 19.3 249320127 2/8/09 1009 2100 17.3 249320127 3/12/09 1200 2200 15.4 249320489 9/26/08 435 1450 13.3 249320489 12/3/08 234 1300 16.4 ...

"DataToPivot.xlsx" attached to page "Pivot Queries"

data Participant ID Date M1 M2 M3 Instrument Setting Operator Email Instrument RunName Comments 249318596 2008-06-30 543 1830 14.5000 24 john.doe ABI-QSTAR Run1 249318596 2008-06-30 520 1850 16.0000 24 john.doe ABI-QSTAR Run2 249318596 2008-09-02 420 1770 12.2000 24 john.doe ABI-QSTAR Run2 249318596 2008-11-23 185 1600 15.5000 24 john.doe ABI-QSTAR Run2 249318596 2009-01-18 261 1300 5.0000 24...

Sample - Specimen 1 - 9353

Derive sample from Participant-249318596.Visit-2804.0.Date-2008-09-02.SpecimenID-526455390.2504... Sample Derivation Protocol - Core Sample Derivation Protocol Specimen ID 526455390.2504.346 rowId 9353 Participant ID 249318596 name Specimen 1 - 9353 Input Samples: ELISpotAssay4

Sample - Specimen 1 - 9356

Derive sample from Participant-249318596.Visit-2804.0.Date-2008-09-02.SpecimenID-526455390.2504... Sample Derivation Protocol - Core Sample Derivation Protocol Specimen ID 526455390.2504.346 rowId 9356 Participant ID 249318596 name Specimen 1 - 9356 Input Samples: ELISpotAssay4

Sample - Specimen 1

Derive sample from Participant-249318596.Visit-2804.0.Date-2008-09-02.SpecimenID-526455390.2504... Sample Derivation Protocol - Core Sample Derivation Protocol rowId 9359 Specimen ID 526455390.2504.346 name Specimen 1 Sample Description Participant ID 249318596 Input Samples: ELISpotAssay

Sample - Specimen 1

Derive sample from Participant-249318596.Visit-2804.0.Date-2008-09-02.SpecimenID-526455390.2504... Sample Derivation Protocol - Core Sample Derivation Protocol Sample Description Participant ID 249318596 name Specimen 1 rowId 9365 Method Dilution Specimen ID 526455390.2504.346 Input Samples: NAbAssay

Interactive.specimens

%/ةد�ذدز # labs lab_id ldms_lab_code labware_lab_code lab_name lab_upload_code is_sal is_repository is_clinic is_endpoint street_address city governing_district country postal_area description 5 435 Mont Montlake University 0 1 0 0 10 460 Hptc High Point Clinic 0 0 1 0 19 350 Delb Delridge Biomedical 0 0 0 1 20 510 Rain Rainier Lab Storage 0 1 0 0 21 515 Alki Alki University...

LabKey.specimens

%/ةد�ذدز # labs lab_id ldms_lab_code labware_lab_code lab_name lab_upload_code is_sal is_repository is_clinic is_endpoint street_address city govering_district country postal_area description 5 435 Mont Montlake University 1 10 460 Hptc High Point Clinic 1 19 350 Delb Delridge Biomedical 1 20 510 Rain Rainier Lab Storage 1 21 515 Alki Alki University 1 ...

specimens.tsv

# specimens record_id record_source global_unique_specimen_id lab_id unique_specimen_id ptid parent_specimen_id draw_timestamp sal_receipt_date specimen_number class_id visit_value protocol_number visit_description other_specimen_id volume volume_units stored storage_flag storage_date ship_flag ship_batch_number ship_date imported_batch_number lab_receipt_date...

Advanced_Archive.specimens

advanced_repository_zip/additives.tsv # additives additive_id ldms_additive_code labware_additive_code additive 8 REDTOP 9 PLAINRED 12 LST_HEP 13 LST_CIT 1 ACD ACD Acid Citrate Dextrose 14 ORA Orasure Collection Container 15 AHP Ammonium Heparin 16 PAC Port-a-cul Transport Tube 17 CPD Citrate Phosphate Dextrose 18 PAX PAXgene Blood RNA tube 19 CPH Cell Preparation Tube Heparin 20 PBS...

dataset5010.tsv

ParticipantId date QCStateLabel RowId M1 M2 M3 File Run.InstrumentSetting Run.Batch.OperatorEmail Run.Batch.Instrument Run.Batch.Instrument.Instrument ID Run.Name Run.Comments 249318596 2008-06-30 00:00:00.0 7 520 1850 16.0 24 john.doe ABI-QSTAR Run2 249318596 2008-06-30 00:00:00.0 1 543 1830 14.5 24 john.doe ABI-QSTAR Run1 249318596 2008-09-02 00:00:00.0 8 420 1770 12.2 24 john.doe ABI-QSTAR...