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jeckels responded: |
2014-11-11 11:27 |
Hi Bront,
Is there a stack trace in the labkey.log file? It would help in determining if it's the same underlying scenario as issue 21294, or something unrelated.
Thanks,
Josh |
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adam responded: |
2014-11-11 11:48 |
Yes, please share the stack trace to help us track down the underlying cause.
I added a workaround for this issue in 14.3, as part of the improvements documented in issue #20880. Once you move to 14.3 let us know if you still see the problem.
Adam |
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bront responded: |
2014-11-11 11:49 |
Here's are a couple of recent errors...
Thanks,
bront
ERROR Table 2014-11-11 14:43:21,393 DavCrawler : SQL Exception
org.postgresql.util.PSQLException: Cannot change transaction isolation level in the middle of a transaction.
at org.postgresql.jdbc2.AbstractJdbc2Connection.setTransactionIsolation(AbstractJdbc2Connection.java:940)
at sun.reflect.GeneratedMethodAccessor155.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.tomcat.jdbc.pool.ProxyConnection.invoke(ProxyConnection.java:126)
at org.apache.tomcat.jdbc.pool.JdbcInterceptor.invoke(JdbcInterceptor.java:109)
at org.apache.tomcat.jdbc.pool.DisposableConnectionFacade.invoke(DisposableConnectionFacade.java:80)
at com.sun.proxy.$Proxy2.setTransactionIsolation(Unknown Source)
at org.labkey.api.data.ConnectionWrapper.setTransactionIsolation(ConnectionWrapper.java:306)
at org.labkey.core.dialect.PostgreSql84Dialect.configureToDisableJdbcCaching(PostgreSql84Dialect.java:1508)
at org.labkey.api.data.ExecutingSelector$ExecutingResultSetFactory.getResultSet(ExecutingSelector.java:297)
at org.labkey.api.data.BaseSelector.handleResultSet(BaseSelector.java:244)
at org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:94)
at org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:141)
at org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:125)
at org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:120)
at org.labkey.search.model.SavePaths.getPaths(SavePaths.java:289)
at org.labkey.search.model.DavCrawler.findSomeWork(DavCrawler.java:523)
at org.labkey.search.model.DavCrawler$1.run(DavCrawler.java:490)
ERROR Table 2014-11-11 14:43:21,393 DavCrawler : SQL [31778]
SELECT Path, LastCrawled, NextCrawl
FROM search.CrawlCollections
WHERE NextCrawl < ? AND (LastCrawled IS NULL OR LastCrawled < ?) ORDER BY NextCrawl
LIMIT 100
?[1] Tue Nov 11 14:43:21 EST 2014
?[2] Tue Nov 11 14:21:00 EST 2014
org.labkey.api.data.ExecutingSelector$ExecutingResultSetFactory.handleSqlException(ExecutingSelector.java:414)
org.labkey.api.data.BaseSelector.handleResultSet(BaseSelector.java:253)
org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:94)
org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:141)
org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:125)
ERROR DavCrawler 2014-11-11 14:43:21,393 DavCrawler : Unexpected error
org.springframework.jdbc.UncategorizedSQLException: ExecutingSelector; uncategorized SQLException for SQL []; SQL state [25001]; error code [0]; Cannot change transaction isolation level in the middle of a transaction.; nested exception is org.postgresql.util.PSQLException: Cannot change transaction isolation level in the middle of a transaction.
at org.springframework.jdbc.support.SQLStateSQLExceptionTranslator.translate(SQLStateSQLExceptionTranslator.java:124)
at org.springframework.jdbc.support.SQLErrorCodeSQLExceptionTranslator.translate(SQLErrorCodeSQLExceptionTranslator.java:322)
at org.labkey.api.data.ExceptionFramework$1.translate(ExceptionFramework.java:38)
at org.labkey.api.data.ExceptionFramework$1.translate(ExceptionFramework.java:32)
at org.labkey.api.data.ExecutingSelector$ExecutingResultSetFactory.handleSqlException(ExecutingSelector.java:416)
at org.labkey.api.data.BaseSelector.handleResultSet(BaseSelector.java:253)
at org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:94)
at org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:141)
at org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:125)
at org.labkey.api.data.ExecutingSelector.getResultSet(ExecutingSelector.java:120)
at org.labkey.search.model.SavePaths.getPaths(SavePaths.java:289)
at org.labkey.search.model.DavCrawler.findSomeWork(DavCrawler.java:523)
at org.labkey.search.model.DavCrawler$1.run(DavCrawler.java:490)
Caused by: org.postgresql.util.PSQLException: Cannot change transaction isolation level in the middle of a transaction.
at org.postgresql.jdbc2.AbstractJdbc2Connection.setTransactionIsolation(AbstractJdbc2Connection.java:940)
at sun.reflect.GeneratedMethodAccessor155.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.tomcat.jdbc.pool.ProxyConnection.invoke(ProxyConnection.java:126)
at org.apache.tomcat.jdbc.pool.JdbcInterceptor.invoke(JdbcInterceptor.java:109)
at org.apache.tomcat.jdbc.pool.DisposableConnectionFacade.invoke(DisposableConnectionFacade.java:80)
at com.sun.proxy.$Proxy2.setTransactionIsolation(Unknown Source)
at org.labkey.api.data.ConnectionWrapper.setTransactionIsolation(ConnectionWrapper.java:306)
at org.labkey.core.dialect.PostgreSql84Dialect.configureToDisableJdbcCaching(PostgreSql84Dialect.java:1508)
at org.labkey.api.data.ExecutingSelector$ExecutingResultSetFactory.getResultSet(ExecutingSelector.java:297)
at org.labkey.api.data.BaseSelector.handleResultSet(BaseSelector.java:244)
... 7 more |
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bront responded: |
2014-11-11 12:04 |
We are also running Ubuntu 14.04 and PostgreSQL 9.3.5.
thanks,
bront |
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