Hi Diego,

Have you had an opportunity to look at our Pipeline information regarding FASTA and MS2 runs?

https://www.labkey.org/home/Documentation/wiki-page.view?name=ms2PipelineSetup#ms2 (also see attached screenshots)

Within the Pipeline setup page, there is a Set FASTA root option where you need to dictate a path for the MS2 search to work with.

Can you set the FASTA root per the instructions/screenshots?

Regards,

Jon