Troubleshotting Reloading Study in a new server with a new version of Labkey Server

LabKey Support Forum (Inactive)
Troubleshotting Reloading Study in a new server with a new version of Labkey Server hilariagrieve  2021-01-27 04:42
Status: Closed
 

When I manually modify the .tsv file in the dataset 5003 and 5004, the systems returns the following log:

26 ene. 2021 12:58:23,219 INFO : Starting to run task 'org.labkey.study.pipeline.StandaloneDatasetTask' at location 'webserver'
26 ene. 2021 12:58:23,259 INFO : Start batch Lims SGFER.dataset
26 ene. 2021 12:58:23,319 INFO : Causas: Starting delete
26 ene. 2021 12:58:23,521 INFO : Causas: Deleted 5091 rows
26 ene. 2021 12:58:23,570 INFO : Causas: Starting import from dataset5001,tsv
26 ene. 2021 12:58:25,324 DEBUG: commit complete
26 ene. 2021 12:58:25,491 INFO : Causas: Successfully imported 5091 rows from dataset5001,tsv
26 ene. 2021 12:58:25,502 INFO : Secuenciacion ABI: Starting delete
26 ene. 2021 12:58:25,508 INFO : Secuenciacion ABI: Deleted 0 rows
26 ene. 2021 12:58:25,511 INFO : Secuenciacion ABI: Starting import from dataset5003,tsv
26 ene. 2021 12:58:27,614 ERROR: dataset5003,tsv -- Row 1 Missing value for required property: Run/STR_Kit1/STR_Kit_Id
26 ene. 2021 12:58:27,621 ERROR: dataset5003,tsv -- Row 1 Missing value for required property: Run/STR_Kit2/STR_Kit_Id
26 ene. 2021 12:58:27,625 ERROR: dataset5003,tsv -- Row 1 Missing value for required property: Run/STR_Kit3/STR_Kit_Id
26 ene. 2021 12:58:27,634 INFO : Extracción de ADN: Starting delete
26 ene. 2021 12:58:27,637 INFO : Extracción de ADN: Deleted 0 rows
26 ene. 2021 12:58:27,668 INFO : Extracción de ADN: Starting import from dataset5004,tsv
26 ene. 2021 12:58:28,004 ERROR: dataset5004,tsv -- Row 1 Missing value for required property: Run/IdInsumo/InsumoId
26 ene. 2021 12:58:28,020 INFO : Cuantificación Fluorimétrica: Starting delete
26 ene. 2021 12:58:28,023 INFO : Cuantificación Fluorimétrica: Deleted 0 rows
26 ene. 2021 12:58:28,032 INFO : Cuantificación Fluorimétrica: Starting import from dataset5005,tsv
26 ene. 2021 12:58:28,108 ERROR: dataset5005,tsv -- Two columns mapped to target column: CausasId
26 ene. 2021 12:58:28,298 INFO : Cuantificación Real Time: Starting delete
26 ene. 2021 12:58:28,301 INFO : Cuantificación Real Time: Deleted 0 rows
26 ene. 2021 12:58:28,316 INFO : Cuantificación Real Time: Starting import from dataset5006,tsv
26 ene. 2021 12:58:28,390 ERROR: dataset5006,tsv -- Two columns mapped to target column: CausasId
26 ene. 2021 12:58:28,434 INFO : Amplificación por PCR: Starting delete
26 ene. 2021 12:58:28,438 INFO : Amplificación por PCR: Deleted 0 rows
26 ene. 2021 12:58:28,450 INFO : Amplificación por PCR: Starting import from dataset5007,tsv
26 ene. 2021 12:58:28,566 ERROR: dataset5007,tsv -- Two columns mapped to target column: CausasId
26 ene. 2021 12:58:28,624 INFO : Finish batch Lims SGFER.dataset
26 ene. 2021 12:58:28,630 INFO : Updating participant visits
26 ene. 2021 12:58:28,631 INFO : Updating participants
26 ene. 2021 12:58:28,665 INFO : Updating participant visit table
26 ene. 2021 12:58:28,666 INFO : Updating visit table
26 ene. 2021 12:58:28,668 INFO : Updating cohorts
26 ene. 2021 12:58:28,670 INFO : Clearing participant visit caches
26 ene. 2021 12:58:28,685 INFO : Finished updating participants
26 ene. 2021 12:58:28,686 INFO : Successfully completed task 'org.labkey.study.pipeline.StandaloneDatasetTask'