This is interesting because it appears to me from your answer that the windows version and/or Java version has not been critical to LabKey's access of the API. Maybe this could possibly be related to me running windows virtually...

The next step is then to try to install LabKey server with the proteomics tools, and verify that this work here. If that is so, I *should* be able to use the LabKey-version of pwiz_swigbindings.dll and java files to access the API.

Thanks for the answer, this might just be the push in the right direction i needed.

Cheers,
Johan