A transformation script can be included in a module-based assay by including a directory called 'scripts' in the assay directory. In this case, the exploded module structure looks something like:

<assay>
|_domains
|_views
|_scripts
|_config.xml

The scripts directory contains one or more script files; e.g., "validation.pl".

The order of script invocation can be specified in the config.xml file. See the <transformScripts> element. If scripts are not listed in the config.xml file, they will be executed in alphabetical order based on file name.

A script engine must be defined for the appropriate type of script (for the example script named above, this would be a Perl engine). The rules for defining a script engine for module-based assays are the same as they are for Java-based assays.

When a new assay instance is created, you will notice that the script appears in the assay designer, but it is read-only (the path cannot be changed or removed). Just as for Java-defined assays, you will still see an additional text box where you can specify one or more additional scripts.

Was this content helpful?

Log in or register an account to provide feedback


previousnext
 
expand allcollapse all