| Title | Description | Version | Video Link | Length |
| LabKey Server Overview | An introduction to LabKey Server. | Video | 4 min | |
| Site Navigation | Navigate projects and folders with popover menus. | Video | 1 min | |
| New Chart Designer | Use drag-and-drop column selection and a more intuitive layout of configuration options to create a visualizations. | 16.3 | Video | 6 mins |
| Pie and Bar Charts | New options for creating bar charts and pie charts as column visualizations and in the chart designer. | 16.3 | Video | 7 mins |
| Title | Description | Version | Video Link | Length |
| Additional Column Summary Statistics | New column summary statistics options including standard deviation and standard error. | 16.3 | Video | 4 mins |
| Apply Template to Multiple Folders | Apply a folder archive template to multiple folders simultaneously. | 16.3 | Video | 8 mins |
| Resolve Samples in Other Locations | Samples in different containers can now be resolved in a single sample set. | 16.3 | Video | 6 mins |
| Retain Luminex Exclusions on Reimport | Users can now opt to retain the exclusion of wells, analytes, or titrations when reimporting Luminex assay runs. | 16.3 | Video | 3 mins |
| Expanded Data Views Customization | Reorder subcategories and alphabetize Items in Data Views Browser. | 16.2 | Video | 5 mins |
| MS2 Reporting Tweaks | Propagate the FDR filter applied to the decoy results to the target peptide results. | 16.2 | Video | 4 mins |
| Panorama QC Improvements | The Quality Control Dashboard shows a summary of the most recent file uploads, along with color-coded QC reports. | 16.2 | Video | 6 mins |
| Notifications for Issues | An experimental feature displays a notification inbox in the upper right corner of the LabKey Server interface. | 16.2 | Video | 6 mins |
| Multiple FASTAs for a Single Search | XTandem and Mascot searches can be performed against multiple FASTAs simultaneously. | 16.2 | Video | 3 mins |
| Small Molecule Support | Panorama QC folders now support both proteomics (peptide/protein) and small molecule data. | 16.2 | Video | 3 mins |
| Self-Service Email Changes | Users can update their own email address. | 16.2 | Video | 3 mins |
| Views/Reports Terminology Updates | The “Views” menu has been renamed to “Grid Views”, and focuses exclusively on modifying grids. The new “Reports” menu consolidates the available report types. | 16.2 | Video | 4 mins |
| Aggregates and Quick Visualizations on Data Grids | Create small charts for one column of data, including Histograms, Box Plots, and Pie Charts. Display aggregate values at the bottom of a data column, including Average, Count, etc. | 16.2 | Video | 7 mins |
| Specimen Repository – FreezerPro Configuration | Add custom fields via the field mapping user interface. To ensure appropriate field mapping, the user interface now filters by data type. Refine data loaded from the FreezerPro server with expanded filter comparators. | 16.2 | Video | 9 mins |
| Improved Issues List Customization | The Issues administration page has been re-organized for clarity and enhanced for ease of use. | 16.2 | Video | 15 mins |
| API Access via Session Key | Compliant API Access to Sensitive Information via Session Key | 16.2 | Video | 7 mins |
| SAML Integration | SAML authentication is now supported in LabKey Server Professional, Professional Plus, and Enterprise Editions. | 16.2 | Video | 7 mins |
| Argos Project | Leverage clinical/patient data for research. Jan 2015 | 15.1 | Video | 6 min |
| Collaborative Dataspace - Overview | Gain new insights from completed studies by pooling data and expertise. July 2014 | 14.2 | Video | 7 min |
| Import Excel Spreadsheets | Consolidate spreadsheets with the data processing pipeline. March 2014 | 14.1 | Video | 3 min |
| ETL Overview | Extract-Transform-Load (ETL) Using LabKey Server. Nov 2013 | 13.3 | Video | 2 min |
| Specimen Management | Specimen Management Using LabKey Server. Nov 2013 | 13.3 | Video | 2 min |
| Visualization Seminar |
Part I - Developer Alan Vezina explains in depth how to create box and scatter plots. |
13.1 |
Part 1 Part 2 Part 3 |
21 min 22 min 9 min |
| REDCap Integration with LabKey Server | Import REDCap data into LabKey Server. | 13.2 | Video | 9 min |
| R Views with knitr | Create views that combine HTML with R script. | 13.2 | Video | 1 min |
| Site Navigation | Navigate projects and folders with popover menus. | 13.2 | Video | 2 min |
| Survey Designer - Quick Tour | Key features of the survey designer | 13.1 | Video | 5 min |
| Panorama Proteomics Webinar |
Targeted proteomics assays. Feb 2013 |
13.1 |
Video | 62 min |
| FCS Express Data Exports | How to use LabKey Server with FCS Express. | 12.3 | Video | 36 min |
| Managing Protected Health Information (PHI) | Review of features for randomizing protected health information. Dec 2012 | 12.3 | Video | 3 min |
| Assessing Data with Quick Charts | Quickly review and assess data with Quick Charts. Aug 2012 | 12.2 | Video | 4 min |
| Study Admin: Organizing Data | Organize your datasets, setting status and category for each item. Aug 2012 | 12.2 | Video | 2 min |
| Security | Sharing Data with Another Lab: configure permissions for outside users. May 2012 | 12.1 | Video | 4 min |
| Participant Lists | Browse participant lists with faceted filtering. May 2012 | 12.1 | Video | 2 min |
| Participant Reports | Create and customize participant data reports. May 2012 | 12.1 | Video | 2 min |
| Visualize Group Data Trends | Visualize group/cohort performance. Jan 2012 | 11.3 | Video | 3 min |
| Ancillary Studies | Create ancillary studies based on a subset of study subjects. Jan 2012 | 11.3 | Video | 2 min |
| Data Browser | Browse visual summaries of study data. Jan 2012 | 11.3 | Video | 2 min |
Our annual User Conference offers an opportunity for all our users to connect with us and with each other to learn more about how LabKey Server can be a part of collaborative, reproducible, and globally distributed research. Some selected videos are included below. More are available on the conference presentation page.
Hope to see you there next time!
| Organization | Title | Conference Year | Presentation | Length |
| Oxford | Integrating Clinical and Laboratory Data from NHS Hospitals for Viral Hepatitis Research - David Smith | 2016 | View | 30 min |
| Fred Hutch | Optide-Hunter: Informatics Solutions for Optimized Peptide Drug Development Through the Integration of Heterogeneous Data and Protein Engineering Hierarchy - Mi-Youn Brusniak | 2016 | View | |
| Genentech | Skyline and Panorama: Key Tools for Establishing a Targeted LC/MS Workflow - Kristin Wildsmith | 2016 | View | 22 min |
| O'Connor Lab | Real-Time Open Data Sharing of Zika Virus Research using LabKey - Michael Graham | 2016 | View | 21 min |
| Just Bio | Therapeutic Antibody Designs for Efficacy and Manufacturability - Randal Ketchem | 2016 | View | 32min |
| HICOR | Using Data Transparency to Improve Cancer Care - Karma Kreizenbeck | 2015 | Video | 17 min |
| IPCR | Providing Access to Aggregated Data without Compromising PHI - Nola Klemfuss | 2015 | Video | 24 min |
| ESBATech | Data Management at ESBATech - Stefan Moese | 2015 | Video | 25 min |
| MHRP | Evolving Lab Workflows to Meet New Demands in the U.S. Military HIV Research Program (MHRP) - Stephen Goodwin | 2015 | Video | 50 min |
| Genomics England | The UK 100,000 Genomes Project - Jim Davies | 2015 | Video | 48 min |
| USF | Maximizing the Research Value of Completed Studies - Steven Fiske | 2015 | Video | 40 min |
| Argos | Unlocking Medical Records with Natural Language Processing - Sarah Ramsay, Emily Silgard, Adam Rauch | 2015 | Video | 48 min |
| WISC | Developing a Mobile UI for Electronic Health Records - Jon Richardson | 2015 | Video | 11 min |
| Artefact | When to Customize: Design of Unique Visual Tools in CDS - Dave McColgin | 2015 | Video | 11 min |
| Panorama | Panorama Public: Publishing Supplementary Targeted Proteomics Data Process with Skyline - Vagisha Sharma | 2015 | Video | 10 min |
| HIPC | Creating Interactive and Reproducible R Reports using LabKey, Rserve, and knitr - Leo Dashevskiy | 2015 | Video | 9 min |
| JPL | Realtime, Synchronous Data Integration across LabKey Application Server Data using High-throughput Distributed Messaging Systems - Lewis McGibbney | 2015 | Video | 13 min |
| HICOR / LabKey | Data Visualization Studio - Catherine Richards and Cory Nathe | 2015 | Video | 52 min |
| LabKey | Schema Studio - Matt Bellew | 2015 | Video | 44 min |
| HIDRA | Progress Report on the Hutch Integrated Data Repository and Archive. Oct 2014 | 2014 | Video | 60 min |
| SCRI | Using Existing LabKey Modules to Build a Platform for Immunotherapy Clinical Trials. Oct 2014 | 2014 | Video | 40 min |
| HIPC | Enabling Integrative Modeling of Human Immunological Data with ImmuneSpace. Oct 2014 | 2014 | Video | 54 min |
| Rho | Using Web-technologies to Improve Data Quality. Oct 2014 | 2014 | Video | 16 min |
| Novo Nordisk | Management and Integration of Diverse Data Types in Type 1 Diabetes Research. Oct 2014 | 2014 | Video | 35 min |
| CDS | The Collaborative Dataspace Program: an Integrated Approach to HIV Vaccine Data Exploration. Oct 2014 | 2014 | Video | 40 min |
| LabKey | Protecting Data, Sharing Data. Oct 2014 | 2014 | Video | 43 min |
| LabKey | Evolution of Connectivity in LabKey Server. Oct 2014 | 2014 | Video | 28 min |
| HIDRA | User Application: The Hutch Integrated Data Repository Archive (HIDRA). Sept 2013 | 2013 | Video | 58 min |
| ITN TrialShare | User Application: ITN TrialShare: Advancing clinical trial transparency through data sharing. Sept 2013 | 2013 | Video | 38 min |
| HIPC | User Application: Using LabKey and the R statistical language to facilitate data integration and reproducible results within the Human Immunology Project Consortium. Sept 2013 | 2013 | Video | 54 min |
| JDRF nPOD | User Application: DataShare: Accelerating Type 1 Diabetes Basic Science Research. Sept 2013 | 2013 | Video | 42 min |
| ICEMR | User Application: The use of LabKey Server in a globally distributed research project. South Asia International Center of Excellence for Malaria Research (ICEMR). Sept 2013 | 2013 | Video | 35 min |
| Overview | Introduction and Overview of LabKey Server. Britt Piehler. Sept 2012 | 2012 | Video | 56 min |
| IDRI | User Application: Adapting LabKey for novel applications: Infectious Disease Research Institute. Sept 2012 | 2012 | Video | 48 min |
| ATLAS | User Application: ATLAS: Data Sharing in HIV Research. Sept 2012 | 2012 | Video | 46 min |
| Dataspace | User Application: The Collaborative Data Space (CDS) as a case study. Sept 2012 | 2012 | Video | 30 min |
| ITN | ITN TrialShare: From Concept to Deployment. Sept 2012 | 2012 | Video | 30 min |
| LabKey | History of LabKey Server. Mark Igra. Sept 2012 | 2012 | Video | 31 min |
| LabKey | LabKey Security. Mark Igra. Sept 2012 | 2012 | Video | 42 min |
| LabKey | LabKey Server Assays: usage and development. Josh Eckels. Sept 2012 | 2012 | Video | 50 min |
| LabKey | LabKey Server Automation: Pipelines. Josh Eckels. Sept 2012 | 2012 | Video | 24 min |
| LabKey APIs | LabKey Server Automation: API Architecture. Karl Lum. Sept 2012 | 2012 | Video | 20 min |
| LabKey | Beyond the grid: using the LabKey reporting system to visualize, analyze, and present data in meaningful ways. Adam Rauch. Sept 2012 | 2012 | Video | 54 min |
As part of the development process, we put together video demonstrations of a few key features which have been through the full develop/test cycle and are planned for the next major release. These videos are often at a more nuts and bolts development level and less polished than if they had been produced for a general audience. Here are a few selected offerings:
| Title | Description | Version | Video Link | Length |
| Workflow | Abstraction Workflow. Susan. March 2016 | 16.1 | Video | 8 mins |
| Workflow | Export Request Workflow. Susan. March 2016 | 16.1 | Video | 4 mins |
| Adjudication | Adjucation Tool. Cory. March 2016 | 16.1 | Video | 13 mins |
| Grid | Support Inline Thumbnails in a Grid. Xing. March 2016 | 16.1 | Video | 3 mins |
| Specimen | FreezerPro Configuration Improvements. Bernie. March 2016 | 16.1 | Video | 5 mins |
| Folder | Study/folder Templates. Susan. March 2016 | 16.1 | Video | 4 mins |
| MS2 | Mascot Related Improvements. Tony. March 2016 | 16.1 | Video | 4 mins |
| HLPC | Chromatogram Enhancements. Ian. March 2016 | 16.1 | Video | 5 mins |
| Dataspace | Dataspace Features: Study Axis, Aggregation. Jessi, Xing, Cory. March 2016 | 16.1 | Video | 13 mins |
| Panorama | Panorama QC Overview Dashboard. Cory. March 2016 | 16.1 | Video | 6 mins |
| Assay | Support for Warnings in Assay Transform Scripts. Marty. March 2016 | 16.1 | Video | 5 mins |
| Genomics | Data Portals, PHI Handling. Dave. March 2016 | 16.1 | Video | 8 mins |
| Compliance | Compliance Module - Activity/IRB/PHI/TOU per Container. Xing. March 2016 | 16.1 | Video | 5 mins |
| MS2 | Post-search Fraction Rollup. Josh. March 2016 | 16.1 | Video | 5 mins |
| Admin | Headless Upgrade Process. Adam. March 2016 | 16.1 | Video | 6 mins |
| Assay | FluoroSpot Assay. Karl. July 2015 | 15.2 | Video | 8 mins |
| Proteomics | Panorama QC Features. Binal. July 2015 | 15.2 | Video | 5 mins |
| Samples | Sample Set Features. Kevin. July 2015 | 15.2 | Video | 7 mins |
| Plot | Categorical Plot Selection. Marty. July 2015 | 15.2 | Video | 3 mins |
| Study | Republish Studies from Manage Page. Cory. July 2015 | 15.2 | Video | 5 mins |
| Export | Permissions Export and Import. Susan. July 2015 | 15.2 | Video | 5 mins |
| Workflow | Test Request Workflow. Susan. July 2015 | 15.2 | Video | 6 mins |
| TOU | Site-wide Terms of Use. Susan. July 2015 | 15.2 | Video | 5 mins |
| Modules | Module Properties. Kevin. July 2015 | 15.2 | Video | 4 mins |
| ETL | ETL Features. Marty. July 2015 | 15.2 | Video | 37 mins |
| Argos | Dashboard, timeline, filtering, security, SQL synonyms. Cory & Adam. March 2015 | 15.1 | Video | 37 mins |
| Panorama | Panorama QC features. Josh. March 2015 | 15.1 | Video | 8 mins |
| ETL | Extract-transform-load enhancements. Tony. March 2015 | 15.1 | Video | 9 mins |
| Study | Thumbnail extraction and dataset tagging. Adam. March 2015 | 15.1 | Video | 7 mins |
| Study | Republishing studies. Aaron. March 2015 | 15.1 | Video | 3 mins |
| Specimens | Specimen import performance improvements. Dave. March 2015 | 15.1 | Video | 7 mins |
| CDS | Plotting large datasets in CDS. Nick. March 2015 | 15.1 | Video | 3 mins |
| O'Connor | Bulk edit for experiments. Nick. March 2015 | 15.1 | Video | 6 mins |
| Luminex | Luminex QC features. Aaron. March 2015 | 15.1 | Video | 7 mins |
| Argos | Accrual estimation report. Cory. December 2014 | 14.3 | Video | 5 mins |
| Argos | Multiple data portals; logging PHI data access. Adam. December 2014 | 14.3 | Video | 11 mins |
| Specimens | Improve specimen rollup rules. Adam. December 2014 | 14.3 | Video | 7 mins |
| Study | Delete sites from study; list management changes. Adam. December 2014 | 14.3 | Video | 10 mins |
| Luminex | Allow use of alternate negative control bead on per-analyte basis. Cory. December 2014 | 14.3 | Video | 8 mins |
| Luminex | Allow calculation of EC-50/AUC controls without adding to L-J plots. Aaron. December 2014 | 14.3 | Video | 4 mins |
| Luminex | Use Uploaded Positivity Cutoff File. Aaron. December 2014 | 14.3 | Video | 4 mins |
| Genotyping | Haplotype Import Behavior. Aaron. December 2014 | 14.3 | Video | 3 mins |
| Genotyping | Report discrepancies between STR and other haplotype assignments. Aaron. December 2014 | 14.3 | Video | 2 mins |
| NAb | NAb: Multi-virus support. Karl. December 2014 | 14.3 | Video | 15 mins |
| Profiler | Mini-profiler. Kevin. December 2014 | 14.3 | Video | 8 mins |
| CDS | Prototype: Large Plots. Nick. December 2014 | 14.3 | Video | 6 mins |
| Sample Indices | Set Default Values for Thaw List. Tony. July 2014 | 14.2 | Video | 6 min |
| FreezerPro API | FreezerPro API Automation. Karl. July 2014 | 14.2 | Video | 12 min |
| Guide Sets | Luminex Metric Tracking Improvements. Cory. July 2014 | 14.2 | Video | 6 min |
| Specimen Admin | Specimen Administration Enhancements. Adam Rauch. July 2014 | 14.2 | Video | 10 min |
| Specimen Reports | Blinded Specimen Progress Report. Cory. July 2014 | 14.2 | Video | 5 min |
| Report Changes | Report and Dataset Editing Changes and Email Notifications. Dave. July 2014 | 14.2 | Video | 8 min |
| Impersonation | Impersonation UI Changes. Adam. July 2014 | 14.2 | Video | 6 min |
| Upload | Drag-and-drop File Uploader. Kevin. July 2014 | 14.2 | Video | 6 min |
| Argos | Argos Application Overview (HIDRA). Cory. July 2014 | 14.2 | Video | 15 min |
| Study Designer | New tools for defining study treatments, immunization, and assay schedules. Cory. March 2014 | 14.1 | Video | 7 min |
| FreezerPro | Import data from FreezerPro archives into a LabKey Study. Karl. March 2014 | 14.1 | Video | 7 min |
| Date Formats | Date Parsing and Formatting. Adam. March 2014 | 14.1 | Video | 11 min |
| Specimen Management | Specimen Management System Enhancements. Adam & Dave. March 2014 | 14.1 | Video | 25 min |
| Draw Timestamp | Specimen Draw Timestamp Change. Dave. March 2014 | 14.1 | Video | 4 min |
| Pipeline Scripts | File-based R Pipeline Scripts. Kevin. March 2014 | 14.1 | Video | 8 min |
| File Uploader | Experimental Feature: Multi-file Uploader. Kevin. March 2014 | 14.1 | Video | 8 min |
| Short URLs | Create memorable, sharable, short URLs. Josh. March 2014 | 14.1 | Video | 5 min |
| Manage Views | The manage views interface is now closely integrated with the data views web part. Karl. Oct 2013 | 13.3 | Video | 8 min |
| Export Charts as JavaScript | Alan demonstrates how to export a chart to JavaScript, edit it, and include it in an HTML page. Sept 2013 | 13.3 | Video | 9 min |
| Survey | Create surveys and long form questionnaires with the survey designer. Cory. Jan 2013 | 13.1 | Video | 33 min |
| Security: Linked Schemas | Securely show selected data in a folder. Mark. April 2013 | 13.1 | Video | 16 min |
| Pathology Viewer | View participants linked to multiple studies and publications. Adam. Jan 2013 | 13.1 | Video | 4 min |
| Title | Description |
| Panorama | Targeted mass spec experiments. Integration with Skyline. June 2013 |
| From the Lab to the Network | LabKey for Labs: managing lab data, data sharing with multiple clients. May 2013 |
| Data Management for Global Health | Research with globally distributed sites, participants, and data. Feb 2013 |
| LabKey Server: Scientific Data Integration, Analysis, Collaboration | LabKey Fundamentals - PDF format. Feb 2013 |
| LabKey Server: An Open Source Platform for Scientific Data Integration | A presentation of LabKey fundamentals. PowerPoint Presentation. Dec 2010 |
| LabKey Training Presentations |
Learn LabKey fundamentals with these training presentations. A series of 10 presentations, including: data analysis, studies, assays, specimens, and server operations. PowerPoint Presentations. Feb 2011 |
| Observational Studies: Manage Data and Specimens | Manage data and specimens in your observational study. PDF file. May 2011 |
| Assays | Move your experimental data our of spreadsheets to an integrated data environment. PDF file. April 2011 |
| Data Management and Integration | A presentation to the 4th International Conference on Primate Genomics. PDF file. April 2010 |
| Managing Next Generation Sequencing and Multiplexed Genotyping Data | Learn the key features of LabKey Server's genotyping tools. PowerPoint Presentation. Dec 2010 |
| Webinar: LabKey Server Release 10.3 | Learn the key features of the 10.3 release. PowerPoint Presentation. Dec 2010 |
| Proteomics 8.3 Webinar | Learn about Proteomics features for the 8.3 release. PDF file. Dec 2008 |
| Reagent Database | Automate high-volume flow cytometry analysis using the Reagent Database Module. PDF file. March 2011 |
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