These components are often used in conjunction with LabKey Server to enhance its functionality. All of the components are optional and are not required for the server to work in general, but some of these components are required for specfic use cases.
Trans Proteomic Pipeline (MS2)
- Information on TPP: http://tools.proteomecenter.org/wiki/index.php?title=Software:TPP
- Install Instructions:
- License: LGPL
- For OSX, this software is only supported for machines running on Intel CPUs.
- If you wish to use TPP version 4.3.1 to produce comparable results to previous datasets, follow these instructions for getting the source instead:
- Component Name: X!Tandem
- Information: As of version 9.3, LabKey Server uses a version of X!Tandem that is included with the TPP.
Proteowizard (MS1, MS2)
pepmatch (MS1, MS2)